Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC096664.2-201ENST00000411843 406 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 SYF2P2-201ENST00000417620 583 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 AC099677.1-201ENST00000420575 175 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 PGBD4P6-201ENST00000421501 610 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 PPP1R11P2-201ENST00000423543 382 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 AC008065.1-201ENST00000428525 348 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 AC097713.2-201ENST00000430199 356 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 RPS15AP10-201ENST00000432472 382 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 AC073063.1-201ENST00000434352 607 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 AC090774.1-201ENST00000435925 246 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 DYNLT3P2-201ENST00000442517 295 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 RPS24P6-201ENST00000452670 400 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.63□□□□□ -1.83
VRK3Q8IV63 RNU7-138P-201ENST00000459479 64 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 RNU6-1095P-201ENST00000516148 108 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 SNORA40.14-201ENST00000516543 86 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.63□□□□□ -1.83
VRK3Q8IV63 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.63□□□□□ -1.83
VRK3Q8IV63 BNIP3P5-201ENST00000562290 498 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 MIR5187-201ENST00000583479 76 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.63□□□□□ -1.83
VRK3Q8IV63 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.63□□□□□ -1.83
VRK3Q8IV63 HMGN2P28-201ENST00000606102 262 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VRK3Q8IV63 AL121772.2-201ENST00000614331 297 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.63□□□□□ -1.83
VRK3Q8IV63 AL049555.1-201ENST00000562834 1933 ntBASIC3.63□□□□□ -1.83
VRK3Q8IV63 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VRK3Q8IV63 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
VRK3Q8IV63 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VRK3Q8IV63 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.62□□□□□ -1.83
VRK3Q8IV63 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.62□□□□□ -1.83
VRK3Q8IV63 MIR423-201ENST00000362201 94 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 RNU6-1155P-201ENST00000363554 107 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 RNA5SP322-201ENST00000363617 119 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 Y_RNA.210-201ENST00000364161 110 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 Y_RNA.288-201ENST00000364854 92 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 SNORD14.1-201ENST00000365609 90 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VRK3Q8IV63 RNA5SP239-201ENST00000410218 129 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 RNU6-174P-201ENST00000410406 106 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 SNORA57.3-201ENST00000411095 141 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 HMGB1P9-201ENST00000429856 646 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 RPL21P2-201ENST00000440049 481 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.62□□□□□ -1.83
VRK3Q8IV63 CHEK2P4-201ENST00000450340 246 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 RNU7-187P-201ENST00000458985 68 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 AC008571.1-201ENST00000467232 300 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 AC093852.1-201ENST00000503587 266 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.62□□□□□ -1.83
VRK3Q8IV63 SNORD116-26-201ENST00000516006 96 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 Y_RNA.680-201ENST00000516441 93 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 RN7SKP209-201ENST00000516888 304 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 Y_RNA.715-201ENST00000517082 110 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 RN7SKP258-201ENST00000517151 304 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.62□□□□□ -1.83
VRK3Q8IV63 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.62□□□□□ -1.83
VRK3Q8IV63 AP003385.6-201ENST00000531603 374 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.62□□□□□ -1.83
VRK3Q8IV63 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.62□□□□□ -1.83
VRK3Q8IV63 AC093227.2-201ENST00000589357 285 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 AC125232.2-201ENST00000592457 143 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 AL020997.2-201ENST00000602607 184 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 IGHV3-29-201ENST00000604817 344 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 AC002044.1-201ENST00000606707 158 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.62□□□□□ -1.83
VRK3Q8IV63 AL450472.3-201ENST00000615578 367 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 MIR4272-201ENST00000635924 64 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 HSPA8P1-201ENST00000425843 1833 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VRK3Q8IV63 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.62□□□□□ -1.83
VRK3Q8IV63 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.62□□□□□ -1.83
VRK3Q8IV63 AL592437.2-201ENST00000421655 2434 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VRK3Q8IV63 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VRK3Q8IV63 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VRK3Q8IV63 AC233263.6-201ENST00000631132 1963 ntBASIC3.62□□□□□ -1.83
VRK3Q8IV63 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.62□□□□□ -1.83
VRK3Q8IV63 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.61□□□□□ -1.83
VRK3Q8IV63 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VRK3Q8IV63 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VRK3Q8IV63 AC008669.1-201ENST00000565823 2178 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.61□□□□□ -1.83
VRK3Q8IV63 RNU1-18P-201ENST00000363062 164 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 RNU6-1303P-201ENST00000364841 107 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 RNU1-64P-201ENST00000365443 163 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 Y_RNA.518-201ENST00000384552 113 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 Y_RNA.577-201ENST00000384794 101 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 RNU6-817P-201ENST00000391083 104 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.61□□□□□ -1.83
VRK3Q8IV63 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.61□□□□□ -1.83
VRK3Q8IV63 RPL23AP50-201ENST00000434149 455 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.61□□□□□ -1.83
VRK3Q8IV63 SNORD127-201ENST00000458892 86 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 RNU6-1132P-201ENST00000459214 107 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 RPL37P6-201ENST00000460682 294 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 RN7SL93P-201ENST00000463035 293 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 RPL9P32-201ENST00000464118 620 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 RPL37P6-202ENST00000464216 403 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms