Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
C12orf40Q86WS4 AL359693.1-201ENST00000614959 2407 ntBASIC4.42□□□□□ -1.7
C12orf40Q86WS4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 RN7SKP280-201ENST00000364196 304 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 RNA5SP175-201ENST00000364275 119 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 RNU1-64P-201ENST00000365443 163 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 RNA5SP283-201ENST00000365604 119 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 MIR190B-201ENST00000401119 79 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AC096920.1-201ENST00000423991 241 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 MTND3P9-201ENST00000429526 346 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 COX6B1P7-201ENST00000430845 235 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 snoU13.24-201ENST00000458998 104 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AC098869.1-201ENST00000481627 292 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 SNORA31.6-201ENST00000516241 130 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 RNU6-182P-201ENST00000516970 105 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AC022080.3-201ENST00000544433 482 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AC004024.1-201ENST00000549244 247 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AL442163.3-201ENST00000554110 156 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AC005476.1-201ENST00000554427 397 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AC104581.2-201ENST00000572227 430 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AC010201.1-201ENST00000605051 540 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 MIR8069-1-201ENST00000616627 86 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 MIR8069-2-201ENST00000621412 86 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 BMS1P21-201ENST00000634565 365 ntBASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
C12orf40Q86WS4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
C12orf40Q86WS4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.4□□□□□ -1.7
C12orf40Q86WS4 RNA5SP130-201ENST00000364431 114 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 RNU6-166P-201ENST00000384371 107 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 MIR34A-201ENST00000385130 110 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 SNORD58.1-201ENST00000391313 66 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 MIR921-201ENST00000401133 56 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 RPS29P13-201ENST00000402041 169 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 RNU2-33P-201ENST00000410344 192 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 SDAD1P3-201ENST00000427380 333 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 AL445433.1-201ENST00000457507 257 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 AC010285.1-201ENST00000470580 392 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 Y_RNA.713-201ENST00000517013 96 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
C12orf40Q86WS4 RRN3P3-201ENST00000549207 578 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 HMGB1P14-201ENST00000557424 591 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.4□□□□□ -1.71
C12orf40Q86WS4 AC009779.6-201ENST00000603972 165 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 AC090132.2-201ENST00000615881 347 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 AC007546.2-201ENST00000623996 360 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 RLIMP1-201ENST00000339626 1680 ntBASIC4.4□□□□□ -1.71
C12orf40Q86WS4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
C12orf40Q86WS4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
C12orf40Q86WS4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
C12orf40Q86WS4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
C12orf40Q86WS4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.4□□□□□ -1.71
C12orf40Q86WS4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
C12orf40Q86WS4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
C12orf40Q86WS4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
C12orf40Q86WS4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
C12orf40Q86WS4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
C12orf40Q86WS4 RNA5SP307-201ENST00000362863 116 ntBASIC4.39□□□□□ -1.71
C12orf40Q86WS4 RNU6-227P-201ENST00000362865 103 ntBASIC4.39□□□□□ -1.71
C12orf40Q86WS4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
C12orf40Q86WS4 Y_RNA.539-201ENST00000384635 107 ntBASIC4.39□□□□□ -1.71
C12orf40Q86WS4 SNORD115-46-201ENST00000390982 71 ntBASIC4.39□□□□□ -1.71
C12orf40Q86WS4 SNORA12.2-201ENST00000391040 156 ntBASIC4.39□□□□□ -1.71
C12orf40Q86WS4 PPIAP31-201ENST00000405422 495 ntBASIC4.39□□□□□ -1.71
C12orf40Q86WS4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.39□□□□□ -1.71
C12orf40Q86WS4 AL117339.2-201ENST00000430475 180 ntBASIC4.39□□□□□ -1.71
C12orf40Q86WS4 MTND5P15-201ENST00000434246 349 ntBASIC4.39□□□□□ -1.71
C12orf40Q86WS4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.39□□□□□ -1.71
C12orf40Q86WS4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.39□□□□□ -1.71
C12orf40Q86WS4 AC034236.1-201ENST00000469891 373 ntBASIC4.39□□□□□ -1.71
C12orf40Q86WS4 RNU6-377P-201ENST00000515965 102 ntBASIC4.39□□□□□ -1.71
C12orf40Q86WS4 MIR2355-201ENST00000517199 87 ntBASIC4.39□□□□□ -1.71
C12orf40Q86WS4 IGKV2-23-201ENST00000518729 323 ntBASIC4.39□□□□□ -1.71
C12orf40Q86WS4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.39□□□□□ -1.71
C12orf40Q86WS4 SNRPGP15-201ENST00000600149 222 ntBASIC4.39□□□□□ -1.71
C12orf40Q86WS4 AP002826.1-201ENST00000608835 315 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms