Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AL589872.1-201ENST00000426602 288 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.94□□□□□ -1.94
NPHP3Q7Z494 AC005094.1-201ENST00000440420 368 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 MTCO3P45-201ENST00000443036 613 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 MTATP6P30-201ENST00000443540 664 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.94□□□□□ -1.94
NPHP3Q7Z494 AC027673.1-201ENST00000456245 405 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 AC010631.1-201ENST00000474150 156 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 MTND1P3-201ENST00000484956 952 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPHP3Q7Z494 FAM92A1P2-202ENST00000504766 877 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPHP3Q7Z494 RNU6-390P-201ENST00000516259 103 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 RNA5SP291-201ENST00000517222 105 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.94□□□□□ -1.94
NPHP3Q7Z494 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.94□□□□□ -1.94
NPHP3Q7Z494 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPHP3Q7Z494 RPL21P5-201ENST00000554662 472 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.94□□□□□ -1.94
NPHP3Q7Z494 MIR4293-201ENST00000584305 78 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 AP000860.1-201ENST00000605250 559 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 AC080013.6-201ENST00000606185 215 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 RNU6-87P-201ENST00000607561 108 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPHP3Q7Z494 AC004852.3-201ENST00000614131 326 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 AC002064.3-201ENST00000623448 346 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 AC090617.7-201ENST00000623952 126 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 AC068880.5-201ENST00000624331 290 ntBASIC2.94□□□□□ -1.94
NPHP3Q7Z494 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPHP3Q7Z494 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.94□□□□□ -1.94
NPHP3Q7Z494 RNU6-223P-201ENST00000362830 107 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 MIR583-201ENST00000384846 75 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 HMGN1P14-201ENST00000412459 517 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AL031667.1-201ENST00000440222 725 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 PGBD4P3-201ENST00000440731 581 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 BNIP3P2-201ENST00000441221 577 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 SSXP1-201ENST00000453640 473 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC010424.1-201ENST00000506336 297 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 NRON-201ENST00000517270 370 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 MIR4781-201ENST00000585250 76 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 RSL24D1P11-201ENST00000591045 491 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AL359999.1-201ENST00000604513 294 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 RN7SKP299-201ENST00000606679 301 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 SDR42E1P2-201ENST00000614861 481 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC008250.2-201ENST00000615261 205 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC006338.1-201ENST00000618453 749 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AL390237.1-201ENST00000404226 1415 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC092104.1-201ENST00000497346 1441 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC099654.7-201ENST00000635788 2127 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 Y_RNA.51-201ENST00000362725 102 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 RNA5SP354-201ENST00000391247 136 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 RPS15AP12-201ENST00000419498 388 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC010153.1-201ENST00000432862 727 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 MTCO1P19-201ENST00000443487 500 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC108059.3-201ENST00000456388 214 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC087190.1-201ENST00000484462 480 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 NDUFB4P2-201ENST00000509515 391 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 RNU2-46P-201ENST00000517038 113 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AP003467.2-201ENST00000520175 319 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC006362.1-201ENST00000567392 174 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC020895.1-201ENST00000595362 272 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.93□□□□□ -1.94
NPHP3Q7Z494 SEPT7P9-203ENST00000604116 343 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AL136363.1-201ENST00000605349 337 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 AC048344.4-201ENST00000619744 527 ntBASIC2.93□□□□□ -1.94
NPHP3Q7Z494 TEX21P-201ENST00000447107 1476 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.92□□□□□ -1.94
NPHP3Q7Z494 RNU1-105P-201ENST00000363470 161 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 RNU4-1-201ENST00000363925 141 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 RNU4-91P-201ENST00000364778 135 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 Y_RNA.553-201ENST00000384670 102 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 MIR767-201ENST00000390228 109 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 SNORA48.3-201ENST00000391081 134 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 RNU6-195P-201ENST00000411352 109 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 RPS3AP3-201ENST00000411933 242 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 ELOCP17-201ENST00000414751 326 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 AC016907.1-201ENST00000419483 435 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms