| ATG9A | Q7Z3C6 | AC233263.6-201 | ENST00000631132 | 1963 nt | BASIC | 3.14 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | EYS-204 | ENST00000370621 | 10485 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.14 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | LINC00305-201 | ENST00000323355 | 873 nt | TSL 1 (best) BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RNU6-179P-201 | ENST00000363350 | 107 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RNU6-1085P-201 | ENST00000363576 | 107 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RNU6-741P-201 | ENST00000383889 | 107 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RNU6-39P-201 | ENST00000384344 | 107 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | SNORA1.3-201 | ENST00000384676 | 136 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RNU6-606P-201 | ENST00000384721 | 111 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RNA5SP210-201 | ENST00000391034 | 120 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | SNORA26.7-201 | ENST00000391288 | 122 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AL365356.1-201 | ENST00000411512 | 736 nt | TSL 3 BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | SDCBPP3-201 | ENST00000419629 | 891 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | EIF1P1-201 | ENST00000421436 | 341 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | TMEM167AP1-201 | ENST00000423409 | 219 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | TTTY8-202 | ENST00000426035 | 518 nt | TSL 1 (best) BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RPL21P2-201 | ENST00000440049 | 481 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | NEFMP1-201 | ENST00000443423 | 1006 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC009237.8-201 | ENST00000445492 | 379 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | GAPDHP27-201 | ENST00000447427 | 1020 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AP000431.2-201 | ENST00000450653 | 790 nt | TSL 2 BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | NHS-AS1-201 | ENST00000452788 | 366 nt | TSL 3 BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | TTTY8B-202 | ENST00000455570 | 518 nt | TSL 1 (best) BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RNA5SP310-201 | ENST00000459084 | 116 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC087588.1-201 | ENST00000462203 | 316 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | SRI-210 | ENST00000490437 | 570 nt | TSL 2 BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC116562.3-201 | ENST00000506136 | 177 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC034226.1-201 | ENST00000506429 | 487 nt | TSL 2 BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | LINC02103-201 | ENST00000512849 | 523 nt | TSL 5 BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RN7SKP24-201 | ENST00000515888 | 284 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RNU6-677P-201 | ENST00000516914 | 101 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC104232.2-201 | ENST00000519680 | 769 nt | TSL 5 BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RPL7P20-201 | ENST00000520308 | 745 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC068587.5-201 | ENST00000528506 | 175 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AP003498.1-201 | ENST00000532530 | 347 nt | TSL 3 BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC007536.1-201 | ENST00000533382 | 349 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RPL23AP78-201 | ENST00000599928 | 470 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC010620.2-201 | ENST00000600135 | 313 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | Z84480.1-201 | ENST00000605131 | 311 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC116312.1-201 | ENST00000606841 | 314 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC004492.1-201 | ENST00000607036 | 742 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC008536.2-201 | ENST00000607284 | 349 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC092794.1-201 | ENST00000612734 | 582 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC004696.1-201 | ENST00000614345 | 607 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | MIR133A1HG-202 | ENST00000581072 | 4226 nt | TSL 1 (best) BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | ZNF470-202 | ENST00000391709 | 6601 nt | APPRIS P1 TSL 5 BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | ANKRD26P2-201 | ENST00000445530 | 1710 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC114316.2-202 | ENST00000502934 | 2957 nt | TSL 2 BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | CDC27-207 | ENST00000531206 | 3177 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | ANKAR-209 | ENST00000520309 | 4410 nt | APPRIS P1 TSL 5 BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | Y_RNA.9-201 | ENST00000362354 | 101 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RNU6-701P-201 | ENST00000384059 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RNU6-517P-201 | ENST00000384362 | 110 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | MIR454-201 | ENST00000390180 | 115 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RN7SKP123-201 | ENST00000410732 | 291 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | MTCO2P19-201 | ENST00000427513 | 598 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC244035.3-201 | ENST00000428399 | 271 nt | TSL 2 BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | CALM2P2-201 | ENST00000428512 | 440 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AL122017.1-201 | ENST00000435858 | 784 nt | TSL 2 BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC018693.1-201 | ENST00000442829 | 550 nt | TSL 4 BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | CBWD4P-201 | ENST00000445695 | 655 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RPL30P5-201 | ENST00000494923 | 336 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | SNORD27.1-201 | ENST00000516319 | 72 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | ZNF706-202 | ENST00000517844 | 604 nt | APPRIS P1 TSL 3 BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | OR5BN1P-201 | ENST00000532955 | 829 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | CLEC2D-214 | ENST00000543300 | 399 nt | TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | CLEC2D-216 | ENST00000545918 | 288 nt | TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC096558.2-201 | ENST00000546678 | 506 nt | TSL 3 BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC005951.2-201 | ENST00000576282 | 495 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | MIR3945-201 | ENST00000581853 | 98 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AL365204.3-201 | ENST00000612448 | 685 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC130324.3-201 | ENST00000614165 | 542 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | C9orf153-205 | ENST00000617985 | 333 nt | APPRIS ALT2 TSL 5 BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | U6.114-201 | ENST00000636407 | 96 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | NANOGNB-202 | ENST00000640040 | 824 nt | APPRIS ALT2 TSL 5 BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | FOXP2-211 | ENST00000408937 | 6443 nt | TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | TPTE2-203 | ENST00000390680 | 1558 nt | TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | OGN-202 | ENST00000375561 | 2743 nt | APPRIS P1 TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | OR5V1-217 | ENST00000641768 | 2763 nt | APPRIS P1 BASIC | 3.12 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AC022336.2-201 | ENST00000568966 | 2538 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | PIK3C2G-202 | ENST00000433979 | 4840 nt | APPRIS P1 TSL 5 BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | CHORDC1-205 | ENST00000529726 | 4805 nt | TSL 2 BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | OR4G2P-201 | ENST00000328113 | 903 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | MDM2-205 | ENST00000348801 | 798 nt | TSL 1 (best) BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RNU6-1322P-201 | ENST00000364309 | 107 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RNU1-100P-201 | ENST00000365255 | 165 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RNU4-48P-201 | ENST00000365559 | 182 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | OR51A4-201 | ENST00000380373 | 1002 nt | APPRIS P1 BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RNU6-74P-201 | ENST00000384235 | 107 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | MIR493-201 | ENST00000385254 | 89 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | RNU6-1197P-201 | ENST00000391183 | 107 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | MIR887-201 | ENST00000401258 | 79 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | SNORD88.1-201 | ENST00000408684 | 91 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | LINC01737-201 | ENST00000412647 | 403 nt | TSL 1 (best) BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AF241725.1-201 | ENST00000416182 | 480 nt | TSL 3 BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AL136369.2-201 | ENST00000420825 | 537 nt | TSL 3 BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | TAAR7P-201 | ENST00000436141 | 242 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | MTATP6P13-201 | ENST00000438531 | 667 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | MTATP6P30-201 | ENST00000443540 | 664 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ATG9A | Q7Z3C6 | AL590664.1-201 | ENST00000448065 | 339 nt | BASIC | 3.11 | □□□□□ -1.91 | | |