Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 MTND4P1-201ENST00000457501 1466 ntBASIC1.43□□□□□ -2.18
SCXQ7RTU7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SCXQ7RTU7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
SCXQ7RTU7 SNORD114-1-201ENST00000362705 72 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 RNU6-1159P-201ENST00000362933 107 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 RNA5SP138-201ENST00000365098 114 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 RNU6-636P-201ENST00000384598 107 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 MIR95-201ENST00000385072 81 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC119751.3-201ENST00000399720 670 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 MIR1289-2-201ENST00000408360 111 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 SNORA11.4-201ENST00000408823 129 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.42□□□□□ -2.18
SCXQ7RTU7 AIMP1P2-201ENST00000425294 312 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC092648.1-201ENST00000425870 423 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 USP9YP24-201ENST00000434374 697 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 TIMM9P1-201ENST00000436122 256 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC009238.1-201ENST00000442165 424 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 USP9YP17-201ENST00000444617 696 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 RPL7P12-201ENST00000446719 750 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC009237.6-201ENST00000446969 424 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 PTENP1-201ENST00000447117 1215 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.42□□□□□ -2.18
SCXQ7RTU7 RPL23AP3-201ENST00000453844 468 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.42□□□□□ -2.18
SCXQ7RTU7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.42□□□□□ -2.18
SCXQ7RTU7 RPL23AP42-201ENST00000471152 471 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC116655.1-201ENST00000508324 901 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 MRPS17P9-201ENST00000511924 393 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.42□□□□□ -2.18
SCXQ7RTU7 SNORA4.4-201ENST00000515921 135 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 RNU6-581P-201ENST00000516214 105 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 RNU6-143P-201ENST00000516942 93 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC009902.1-201ENST00000519351 183 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC107953.1-201ENST00000522216 297 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.42□□□□□ -2.18
SCXQ7RTU7 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC079598.5-201ENST00000547460 117 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.42□□□□□ -2.18
SCXQ7RTU7 MIR4509-3-201ENST00000578671 94 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SCXQ7RTU7 MIR4509-2-201ENST00000583920 94 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 BNIP3P9-201ENST00000603714 553 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AL670379.6-201ENST00000603753 252 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AL670379.11-201ENST00000604059 253 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC008162.1-201ENST00000604718 254 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AL670379.1-201ENST00000604752 252 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AL670379.5-201ENST00000605253 252 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AL670379.12-201ENST00000605291 253 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AL158042.1-201ENST00000605338 460 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AL670379.8-201ENST00000605353 252 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AL670379.7-201ENST00000605823 252 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 RNU4-5P-201ENST00000607255 135 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 RNU6-91P-201ENST00000607774 107 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.42□□□□□ -2.18
SCXQ7RTU7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.42□□□□□ -2.18
SCXQ7RTU7 MIR4509-1-201ENST00000618224 94 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 MIR5739-201ENST00000619803 80 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 MIR6132-201ENST00000622083 109 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 MIR6766-201ENST00000622641 72 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC091932.3-201ENST00000624223 323 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.42□□□□□ -2.18
SCXQ7RTU7 AC099654.9-201ENST00000637055 678 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 U6.99-201ENST00000637524 83 ntBASIC1.42□□□□□ -2.18
SCXQ7RTU7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SCXQ7RTU7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
SCXQ7RTU7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.42□□□□□ -2.18
SCXQ7RTU7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SCXQ7RTU7 MTND4P9-201ENST00000507819 1346 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.41□□□□□ -2.18
SCXQ7RTU7 AL355596.1-201ENST00000565399 3996 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SCXQ7RTU7 U3.13-201ENST00000364804 214 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 RNA5SP240-201ENST00000365355 128 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 RNA5SP88-201ENST00000365560 109 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 RNU6-701P-201ENST00000384059 107 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 RNU6-1176P-201ENST00000390955 107 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 RN7SKP32-201ENST00000410167 303 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 RNA5SP338-201ENST00000410495 85 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 RNA5SP450-201ENST00000411206 102 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 AC078974.1-201ENST00000411597 223 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 HMGB3P2-201ENST00000411913 584 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.41□□□□□ -2.18
SCXQ7RTU7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.41□□□□□ -2.18
SCXQ7RTU7 HMGN2P38-201ENST00000423806 265 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 RAC1P6-201ENST00000423911 575 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.41□□□□□ -2.18
SCXQ7RTU7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.41□□□□□ -2.18
SCXQ7RTU7 HMGN2P3-201ENST00000433603 273 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.41□□□□□ -2.18
SCXQ7RTU7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.41□□□□□ -2.18
SCXQ7RTU7 HMGN2P5-201ENST00000436882 273 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SCXQ7RTU7 NEFMP1-201ENST00000443423 1006 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 FCF1P6-201ENST00000456841 595 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 RNU6-953P-201ENST00000459154 107 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 AC104435.1-201ENST00000483483 166 ntBASIC1.41□□□□□ -2.18
SCXQ7RTU7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms