Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 RPL7P10-201ENST00000417407 739 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 MTCO1P20-201ENST00000425366 358 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 AL512844.2-201ENST00000433990 593 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 SNRPEP4-201ENST00000435815 279 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 SEPT14P3-201ENST00000439401 183 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 AL732372.2-207ENST00000445840 183 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 AL590664.1-201ENST00000448065 339 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 SEPT14P2-201ENST00000453405 183 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 AC083906.5-201ENST00000503722 328 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 SUMO2P6-201ENST00000505273 288 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 RBBP4P6-201ENST00000508098 202 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 SEPT14P4-201ENST00000513445 186 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 AL117351.2-201ENST00000513571 157 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-123P-201ENST00000516163 102 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-1178P-201ENST00000516674 107 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 FO082796.1-201ENST00000523795 183 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 RANP3-201ENST00000530970 276 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 AC022080.3-201ENST00000544433 482 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 ADI1P3-201ENST00000549509 470 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 AL138976.2-201ENST00000563989 694 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 MIR3200-201ENST00000580767 85 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 MIR4424-201ENST00000585257 86 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 MIR15A-201ENST00000607334 83 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 AL138880.2-201ENST00000616214 239 ntBASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SYNE3Q6ZMZ3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-451P-201ENST00000362921 107 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 Y_RNA.89-201ENST00000363031 102 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-288P-201ENST00000363690 104 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 Y_RNA.248-201ENST00000364501 109 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-534P-201ENST00000364877 106 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 Y_RNA.381-201ENST00000365666 102 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 UBE2V1P2-201ENST00000397758 440 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 AL591416.1-201ENST00000404015 867 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 FAT1P1-201ENST00000406588 507 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-193P-201ENST00000410977 107 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 OR6C66P-201ENST00000414917 930 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 USP9YP27-201ENST00000418455 438 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 RPL23AP83-201ENST00000434984 473 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 RBMX2P4-201ENST00000441256 376 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 RPL21P41-201ENST00000459863 264 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 AC104806.1-201ENST00000508720 308 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-718P-201ENST00000516166 105 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 RNA5SP290-201ENST00000517133 127 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 AC008945.2-201ENST00000606056 604 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 AC002076.2-201ENST00000617362 122 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 YWHAEP7-203ENST00000622054 312 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 U6.114-201ENST00000636407 96 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 AL354685.2-201ENST00000448218 1447 ntBASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.42□□□□□ -1.86
SYNE3Q6ZMZ3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 SNORA48.5-201ENST00000391143 135 ntBASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 BTF3P7-201ENST00000407097 488 ntBASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 AL160275.3-201ENST00000423876 471 ntBASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 AC007919.1-201ENST00000429380 217 ntBASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 AC092573.2-201ENST00000434546 243 ntBASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 CALM1P1-201ENST00000442082 433 ntBASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 RNU7-180P-201ENST00000459240 63 ntBASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 AC006512.1-201ENST00000468816 291 ntBASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 RPL23AP11-201ENST00000475260 469 ntBASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 AP004217.1-201ENST00000480579 346 ntBASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 AC092325.1-201ENST00000566449 554 ntBASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 HSPE1P7-201ENST00000604681 321 ntBASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 ATP5A1P2-202ENST00000616464 443 ntBASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 AL354950.2-201ENST00000617939 290 ntBASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.41□□□□□ -1.86
SYNE3Q6ZMZ3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms