Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 AL513302.2-201ENST00000562313 1842 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 RNU6-82P-201ENST00000363970 107 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 RNU6-371P-201ENST00000364283 108 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 RNA5SP72-201ENST00000364442 117 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 Y_RNA.245-201ENST00000364493 95 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 U3.12-201ENST00000364498 214 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 RNU6-434P-201ENST00000384376 107 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 Y_RNA.530-201ENST00000384587 101 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 MIR578-201ENST00000384828 96 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 MIR490-201ENST00000384865 128 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 MT-TD-201ENST00000387419 68 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 RNU1-101P-201ENST00000391171 127 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AL591704.1-201ENST00000432574 275 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AL159987.2-201ENST00000432754 307 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AC092573.2-201ENST00000434546 243 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AC021205.2-201ENST00000480069 347 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AC093663.1-201ENST00000497190 394 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 RNU6-143P-201ENST00000516942 93 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AC105029.1-201ENST00000520250 669 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 NDUFB9P3-201ENST00000521269 501 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AC012119.1-201ENST00000603184 222 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AC107294.1-201ENST00000609524 467 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 AL355365.1-201ENST00000616480 294 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 SNORD39.4-201ENST00000620099 78 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 FAM35BP-202ENST00000497389 3337 ntBASIC3.87□□□□□ -1.79
PPP4R3AQ6IN85 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 RNU1-33P-201ENST00000364249 162 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 RNU6-1303P-201ENST00000364841 107 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 Y_RNA.414-201ENST00000384011 101 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 RNU6-45P-201ENST00000384471 107 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 RNA5SP38-201ENST00000410750 119 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 Z99755.1-201ENST00000414048 380 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 AC005019.1-201ENST00000436455 431 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 AC009237.8-201ENST00000445492 379 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 AC006539.3-201ENST00000454258 129 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 RPL23AP67-201ENST00000465341 474 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 AC034236.1-201ENST00000469891 373 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 RPL7P49-201ENST00000471402 708 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 RPL21P13-201ENST00000488305 481 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 AL160314.1-201ENST00000490836 438 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 HIGD1AP13-201ENST00000509878 289 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 Y_RNA.675-201ENST00000516389 149 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 AC090136.1-201ENST00000520009 240 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 AC011611.1-201ENST00000552179 197 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 AC090115.3-201ENST00000553218 849 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 TGIF1P1-201ENST00000558095 802 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 AC024220.1-201ENST00000603675 484 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 AL132765.2-201ENST00000610812 351 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 uc_338.5-201ENST00000611839 155 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 AC092628.2-201ENST00000622492 339 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 U6.105-201ENST00000637379 88 ntBASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.86□□□□□ -1.79
PPP4R3AQ6IN85 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 USP9YP20-201ENST00000419224 558 ntBASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 RPS15AP6-201ENST00000420703 385 ntBASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 GPM6BP2-201ENST00000432046 144 ntBASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 GPM6BP1-201ENST00000446387 144 ntBASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 AL360271.2-201ENST00000447710 161 ntBASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 CECR9-201ENST00000453421 199 ntBASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 RPL21P10-201ENST00000463521 490 ntBASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 RN7SL330P-201ENST00000469709 307 ntBASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 RPL7P43-201ENST00000478876 753 ntBASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 RPL30P5-201ENST00000494923 336 ntBASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 AC011602.1-201ENST00000546484 331 ntBASIC3.85□□□□□ -1.79
PPP4R3AQ6IN85 AC093027.1-201ENST00000546698 429 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms