Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.21□□□□□ -2.38
UBR4Q5T4S7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
UBR4Q5T4S7 Z75746.1-201ENST00000440243 2080 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 RNY4P36-201ENST00000391116 96 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 CISD1P1-201ENST00000393907 327 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 NDUFA5P10-201ENST00000432147 357 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
UBR4Q5T4S7 AC040926.1-201ENST00000530195 238 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 CENPUP2-201ENST00000555897 1186 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 AC084757.1-201ENST00000559987 490 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 MIR4764-201ENST00000580680 88 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 Y_RNA.256-201ENST00000364594 104 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 HMGN2P10-201ENST00000448085 265 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.21□□□□□ -2.38
UBR4Q5T4S7 AC104685.1-201ENST00000502445 371 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 RNU6-1297P-201ENST00000384415 104 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 HSFY3P-201ENST00000444242 1191 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.21□□□□□ -2.38
UBR4Q5T4S7 RNU6-928P-201ENST00000516876 104 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 AC008562.1-201ENST00000521763 330 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 AC115085.1-201ENST00000588924 229 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 HSPE1P14-201ENST00000605812 302 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 Y_RNA.452-201ENST00000384202 108 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 AL161449.1-201ENST00000414531 1199 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
UBR4Q5T4S7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.2□□□□□ -2.38
UBR4Q5T4S7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.2□□□□□ -2.38
UBR4Q5T4S7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC0.2□□□□□ -2.38
UBR4Q5T4S7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
UBR4Q5T4S7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.2□□□□□ -2.38
UBR4Q5T4S7 AC099677.1-201ENST00000420575 175 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.2□□□□□ -2.38
UBR4Q5T4S7 MTND3P24-201ENST00000506306 329 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 SCARNA8-201ENST00000515924 131 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 SNORD84-203ENST00000584275 78 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 MIR4324-201ENST00000584846 72 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 AC008751.2-201ENST00000597885 980 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 AL157700.1-201ENST00000561973 1432 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 FO393413.1-201ENST00000402892 195 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.2□□□□□ -2.38
UBR4Q5T4S7 AC138853.1-201ENST00000503549 823 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.2□□□□□ -2.38
UBR4Q5T4S7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.2□□□□□ -2.38
UBR4Q5T4S7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.2□□□□□ -2.38
UBR4Q5T4S7 GDI2P1-201ENST00000429312 1336 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 SFR1P1-201ENST00000403720 688 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 AL135752.1-201ENST00000479477 471 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
UBR4Q5T4S7 RRN3P3-201ENST00000549207 578 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.2□□□□□ -2.38
UBR4Q5T4S7 CD24P2-201ENST00000565486 219 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 AL121992.2-201ENST00000606262 256 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 AP001350.1-201ENST00000601906 1524 ntBASIC0.2□□□□□ -2.38
UBR4Q5T4S7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 RNU6-1082P-201ENST00000364574 107 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 NF1P3-201ENST00000457709 450 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 SCARNA11.3-201ENST00000517276 130 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 AL163153.1-201ENST00000554223 283 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 AC005332.10-201ENST00000612725 619 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 DUSP12P1-201ENST00000612874 516 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 MTND4P34-201ENST00000572715 1371 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 RPS24P6-201ENST00000452670 400 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.19□□□□□ -2.38
UBR4Q5T4S7 MED28P6-201ENST00000558776 231 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 AL162373.1-201ENST00000620433 407 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 AC007275.1-201ENST00000621243 671 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 AC008555.8-201ENST00000623602 2168 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 SNORA67.1-201ENST00000364749 141 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 RNA5SP471-201ENST00000516971 106 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.19□□□□□ -2.38
UBR4Q5T4S7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.19□□□□□ -2.38
UBR4Q5T4S7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.19□□□□□ -2.38
UBR4Q5T4S7 AC015849.6-201ENST00000605454 474 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 AL021879.1-201ENST00000611756 288 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
UBR4Q5T4S7 RNU6-25P-201ENST00000383873 107 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 RNU6-29P-201ENST00000384637 107 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 RNU6-27P-201ENST00000516146 107 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 MIR3165-201ENST00000579874 75 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 AC008749.1-201ENST00000597650 306 ntBASIC0.19□□□□□ -2.38
UBR4Q5T4S7 TMEM167AP1-201ENST00000423409 219 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 SNORD108-201ENST00000459332 71 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 COX6CP6-201ENST00000490840 228 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 AC084824.5-201ENST00000612009 413 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.18□□□□□ -2.38
UBR4Q5T4S7 RNU6-349P-201ENST00000362402 107 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 AC106901.1-201ENST00000425086 698 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 RPS26P55-201ENST00000471178 356 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.18□□□□□ -2.38
UBR4Q5T4S7 AC105252.1-201ENST00000503089 286 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 AC025768.1-201ENST00000510057 267 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 MIR4287-201ENST00000579398 78 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 CBX3P1-201ENST00000325243 554 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 RNA5SP192-201ENST00000364404 120 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC0.18□□□□□ -2.38
UBR4Q5T4S7 RNFT1P2-201ENST00000443064 757 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 RNU1-131P-201ENST00000458943 161 ntBASIC0.18□□□□□ -2.38
UBR4Q5T4S7 MIR17-201ENST00000385012 84 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms