Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC016925.2-201ENST00000605108 242 ntBASIC0.34□□□□□ -2.35
LRRK2Q5S007 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.34□□□□□ -2.36
LRRK2Q5S007 Y_RNA.410-201ENST00000383992 113 ntBASIC0.34□□□□□ -2.36
LRRK2Q5S007 MIR214-201ENST00000385214 110 ntBASIC0.34□□□□□ -2.36
LRRK2Q5S007 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
LRRK2Q5S007 UBE2FP1-201ENST00000416536 447 ntBASIC0.34□□□□□ -2.36
LRRK2Q5S007 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.34□□□□□ -2.36
LRRK2Q5S007 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.34□□□□□ -2.36
LRRK2Q5S007 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
LRRK2Q5S007 AL590365.1-201ENST00000450788 243 ntBASIC0.34□□□□□ -2.36
LRRK2Q5S007 AC087884.1-201ENST00000469738 328 ntBASIC0.34□□□□□ -2.36
LRRK2Q5S007 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.34□□□□□ -2.36
LRRK2Q5S007 MIR5190-201ENST00000581537 80 ntBASIC0.34□□□□□ -2.36
LRRK2Q5S007 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.34□□□□□ -2.36
LRRK2Q5S007 PRR13P7-201ENST00000605538 430 ntBASIC0.34□□□□□ -2.36
LRRK2Q5S007 AC084824.5-201ENST00000612009 413 ntBASIC0.34□□□□□ -2.36
LRRK2Q5S007 uc_338.6-201ENST00000613544 171 ntBASIC0.34□□□□□ -2.36
LRRK2Q5S007 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.34□□□□□ -2.36
LRRK2Q5S007 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.34□□□□□ -2.36
LRRK2Q5S007 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.33□□□□□ -2.36
LRRK2Q5S007 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
LRRK2Q5S007 VN1R36P-201ENST00000414936 291 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 AL645638.1-201ENST00000440519 361 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 NDUFB4P10-201ENST00000452541 359 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 SETP11-201ENST00000473027 690 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.33□□□□□ -2.36
LRRK2Q5S007 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.33□□□□□ -2.36
LRRK2Q5S007 RN7SKP5-201ENST00000517045 272 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 AC141557.1-201ENST00000540982 400 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 AC018638.7-201ENST00000605836 1114 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 AL590282.1-201ENST00000610379 1136 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 MIR4496-201ENST00000635896 61 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 FAM157B-203ENST00000639350 358 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 AC110792.3-201ENST00000595906 1614 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 TPTE2P4-201ENST00000258589 1605 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 RNA5SP125-201ENST00000364843 120 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 OR9R1P-201ENST00000412200 877 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.33□□□□□ -2.36
LRRK2Q5S007 AC087879.1-201ENST00000474343 374 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 RNU6-1004P-201ENST00000516584 111 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 SNORA48.10-201ENST00000516965 160 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 AP003717.3-201ENST00000544832 1180 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.33□□□□□ -2.36
LRRK2Q5S007 AC025165.5-201ENST00000602802 578 ntBASIC0.33□□□□□ -2.36
LRRK2Q5S007 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
LRRK2Q5S007 MIR934-201ENST00000401241 83 ntBASIC0.32□□□□□ -2.36
LRRK2Q5S007 RPS26P42-201ENST00000413485 326 ntBASIC0.32□□□□□ -2.36
LRRK2Q5S007 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.32□□□□□ -2.36
LRRK2Q5S007 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.32□□□□□ -2.36
LRRK2Q5S007 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.32□□□□□ -2.36
LRRK2Q5S007 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.32□□□□□ -2.36
LRRK2Q5S007 MTND2P13-201ENST00000577438 1039 ntBASIC0.32□□□□□ -2.36
LRRK2Q5S007 uc_338.17-201ENST00000619633 179 ntBASIC0.32□□□□□ -2.36
LRRK2Q5S007 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.32□□□□□ -2.36
LRRK2Q5S007 AC087821.2-201ENST00000637086 450 ntBASIC0.32□□□□□ -2.36
LRRK2Q5S007 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.32□□□□□ -2.36
LRRK2Q5S007 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
LRRK2Q5S007 Y_RNA.52-201ENST00000362760 96 ntBASIC0.32□□□□□ -2.36
LRRK2Q5S007 AL356320.2-201ENST00000417263 507 ntBASIC0.32□□□□□ -2.36
LRRK2Q5S007 MTND4P6-201ENST00000438297 472 ntBASIC0.32□□□□□ -2.36
LRRK2Q5S007 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.32□□□□□ -2.36
LRRK2Q5S007 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
LRRK2Q5S007 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.32□□□□□ -2.36
LRRK2Q5S007 MIR548AX-201ENST00000580117 73 ntBASIC0.32□□□□□ -2.36
LRRK2Q5S007 MIR3616-201ENST00000584070 92 ntBASIC0.32□□□□□ -2.36
LRRK2Q5S007 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.32□□□□□ -2.36
LRRK2Q5S007 AP002791.1-201ENST00000623291 381 ntBASIC0.32□□□□□ -2.36
LRRK2Q5S007 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
LRRK2Q5S007 AC008163.1-202ENST00000636004 2889 ntBASIC0.32□□□□□ -2.36
LRRK2Q5S007 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.31□□□□□ -2.36
LRRK2Q5S007 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.31□□□□□ -2.36
LRRK2Q5S007 RPL39P28-201ENST00000465655 155 ntBASIC0.31□□□□□ -2.36
LRRK2Q5S007 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.31□□□□□ -2.36
LRRK2Q5S007 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.31□□□□□ -2.36
LRRK2Q5S007 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.31□□□□□ -2.36
LRRK2Q5S007 AC090616.5-202ENST00000582111 297 ntBASIC0.31□□□□□ -2.36
LRRK2Q5S007 AC034236.3-201ENST00000605999 461 ntBASIC0.31□□□□□ -2.36
LRRK2Q5S007 U3.13-201ENST00000364804 214 ntBASIC0.31□□□□□ -2.36
LRRK2Q5S007 Y_RNA.583-201ENST00000391033 113 ntBASIC0.31□□□□□ -2.36
LRRK2Q5S007 RNU1-119P-201ENST00000391122 165 ntBASIC0.31□□□□□ -2.36
LRRK2Q5S007 MTCO1P56-201ENST00000401674 224 ntBASIC0.31□□□□□ -2.36
LRRK2Q5S007 RPS3AP24-201ENST00000407896 734 ntBASIC0.31□□□□□ -2.36
LRRK2Q5S007 AC107626.1-201ENST00000471084 183 ntBASIC0.31□□□□□ -2.36
LRRK2Q5S007 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.31□□□□□ -2.36
LRRK2Q5S007 AC090142.3-201ENST00000519012 385 ntBASIC0.31□□□□□ -2.36
LRRK2Q5S007 AGGF1P5-201ENST00000567900 919 ntBASIC0.31□□□□□ -2.36
LRRK2Q5S007 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.31□□□□□ -2.36
LRRK2Q5S007 FAM60BP-201ENST00000578364 658 ntBASIC0.31□□□□□ -2.36
LRRK2Q5S007 UCA1.1-201ENST00000620952 75 ntBASIC0.31□□□□□ -2.36
LRRK2Q5S007 Y_RNA.204-201ENST00000364112 102 ntBASIC0.3□□□□□ -2.36
LRRK2Q5S007 RNU6-1187P-201ENST00000364771 110 ntBASIC0.3□□□□□ -2.36
LRRK2Q5S007 RNU6-939P-201ENST00000384634 107 ntBASIC0.3□□□□□ -2.36
LRRK2Q5S007 RPS3AP36-201ENST00000398190 775 ntBASIC0.3□□□□□ -2.36
LRRK2Q5S007 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.3□□□□□ -2.36
LRRK2Q5S007 AC013410.2-201ENST00000422627 201 ntBASIC0.3□□□□□ -2.36
LRRK2Q5S007 RPL23AP6-201ENST00000446637 472 ntBASIC0.3□□□□□ -2.36
LRRK2Q5S007 RPS15AP27-201ENST00000449183 343 ntBASIC0.3□□□□□ -2.36
LRRK2Q5S007 RPS27AP8-201ENST00000452665 445 ntBASIC0.3□□□□□ -2.36
LRRK2Q5S007 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms