Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SOX4Q06945 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SOX4Q06945 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX4Q06945 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX4Q06945 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.52□□□□□ -1.69
SOX4Q06945 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SOX4Q06945 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.51□□□□□ -1.69
SOX4Q06945 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SOX4Q06945 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SOX4Q06945 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SOX4Q06945 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SOX4Q06945 RNU5A-1-201ENST00000362698 116 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 RNU6-493P-201ENST00000391321 108 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX4Q06945 RNU2-20P-201ENST00000410425 191 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 Y_RNA.602-201ENST00000410535 92 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.51□□□□□ -1.69
SOX4Q06945 AL117339.3-201ENST00000418733 162 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.51□□□□□ -1.69
SOX4Q06945 NDUFB4P10-201ENST00000452541 359 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX4Q06945 AC108145.1-201ENST00000503770 153 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 RNU6-612P-201ENST00000516909 102 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX4Q06945 AC087441.2-201ENST00000529141 262 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.51□□□□□ -1.69
SOX4Q06945 AC010186.2-204ENST00000537668 439 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 AC022968.1-201ENST00000567372 442 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 AC104581.2-201ENST00000572227 430 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX4Q06945 AL161798.1-201ENST00000604630 131 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 AC073657.2-201ENST00000605661 303 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 AL138721.1-201ENST00000616756 179 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 AC112484.5-201ENST00000624189 228 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX4Q06945 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SOX4Q06945 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.51□□□□□ -1.69
SOX4Q06945 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SOX4Q06945 LINC01109-201ENST00000603837 3081 ntBASIC4.51□□□□□ -1.69
SOX4Q06945 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SOX4Q06945 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.51□□□□□ -1.69
SOX4Q06945 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SOX4Q06945 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.5□□□□□ -1.69
SOX4Q06945 AP001273.1-201ENST00000624493 3152 ntBASIC4.5□□□□□ -1.69
SOX4Q06945 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SOX4Q06945 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SOX4Q06945 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.5□□□□□ -1.69
SOX4Q06945 MIR411-201ENST00000362239 96 ntBASIC4.5□□□□□ -1.69
SOX4Q06945 RNA5SP240-201ENST00000365355 128 ntBASIC4.5□□□□□ -1.69
SOX4Q06945 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SOX4Q06945 RNU6-1140P-201ENST00000410517 106 ntBASIC4.5□□□□□ -1.69
SOX4Q06945 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX4Q06945 AL117339.2-201ENST00000430475 180 ntBASIC4.5□□□□□ -1.69
SOX4Q06945 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.5□□□□□ -1.69
SOX4Q06945 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX4Q06945 AL132838.2-201ENST00000492041 314 ntBASIC4.5□□□□□ -1.69
SOX4Q06945 AK3P2-201ENST00000507976 429 ntBASIC4.5□□□□□ -1.69
SOX4Q06945 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.5□□□□□ -1.69
SOX4Q06945 SNORD116-26-201ENST00000516006 96 ntBASIC4.5□□□□□ -1.69
SOX4Q06945 MIR2116-201ENST00000517221 80 ntBASIC4.5□□□□□ -1.69
SOX4Q06945 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SOX4Q06945 AC084851.1-201ENST00000529105 249 ntBASIC4.5□□□□□ -1.69
SOX4Q06945 AC024405.2-202ENST00000532731 184 ntBASIC4.5□□□□□ -1.69
SOX4Q06945 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.5□□□□□ -1.69
SOX4Q06945 AL121603.1-201ENST00000553815 142 ntBASIC4.5□□□□□ -1.69
SOX4Q06945 HMGB1P14-201ENST00000557424 591 ntBASIC4.5□□□□□ -1.69
SOX4Q06945 RPL21P7-201ENST00000557463 483 ntBASIC4.5□□□□□ -1.69
SOX4Q06945 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX4Q06945 AC002545.1-201ENST00000592511 181 ntBASIC4.5□□□□□ -1.69
SOX4Q06945 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.5□□□□□ -1.69
SOX4Q06945 U2.14-201ENST00000615943 113 ntBASIC4.5□□□□□ -1.69
SOX4Q06945 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX4Q06945 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SOX4Q06945 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.5□□□□□ -1.69
SOX4Q06945 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX4Q06945 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX4Q06945 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
SOX4Q06945 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.5□□□□□ -1.69
SOX4Q06945 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.5□□□□□ -1.69
SOX4Q06945 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX4Q06945 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX4Q06945 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX4Q06945 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SOX4Q06945 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX4Q06945 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SOX4Q06945 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SOX4Q06945 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
SOX4Q06945 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SOX4Q06945 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.49□□□□□ -1.69
SOX4Q06945 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX4Q06945 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.49□□□□□ -1.69
SOX4Q06945 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX4Q06945 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.49□□□□□ -1.69
SOX4Q06945 SNORD113-8-201ENST00000363497 74 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 RN7SKP280-201ENST00000364196 304 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 RNU6-1074P-201ENST00000383995 104 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 MIR153-1-201ENST00000384914 90 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 AL079342.1-201ENST00000401460 267 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 PPIAP31-201ENST00000405422 495 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms