Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 BX322784.1-201ENST00000455793 1077 ntBASIC0.89□□□□□ -2.27
HIST1H1AQ02539 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.89□□□□□ -2.27
HIST1H1AQ02539 SNORA25.11-201ENST00000515935 105 ntBASIC0.89□□□□□ -2.27
HIST1H1AQ02539 OR5B19P-201ENST00000531766 928 ntBASIC0.89□□□□□ -2.27
HIST1H1AQ02539 AC025918.2-201ENST00000558683 763 ntBASIC0.89□□□□□ -2.27
HIST1H1AQ02539 AC012213.3-201ENST00000577199 777 ntBASIC0.89□□□□□ -2.27
HIST1H1AQ02539 MIR3660-201ENST00000584845 100 ntBASIC0.89□□□□□ -2.27
HIST1H1AQ02539 AC073413.2-201ENST00000604332 360 ntBASIC0.89□□□□□ -2.27
HIST1H1AQ02539 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.88□□□□□ -2.27
HIST1H1AQ02539 MTND5P9-201ENST00000503854 1755 ntBASIC0.88□□□□□ -2.27
HIST1H1AQ02539 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
HIST1H1AQ02539 TEX21P-201ENST00000447107 1476 ntBASIC0.88□□□□□ -2.27
HIST1H1AQ02539 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.88□□□□□ -2.27
HIST1H1AQ02539 RN7SKP284-201ENST00000411002 343 ntBASIC0.88□□□□□ -2.27
HIST1H1AQ02539 AC092648.1-201ENST00000425870 423 ntBASIC0.88□□□□□ -2.27
HIST1H1AQ02539 MTND5P25-201ENST00000430499 799 ntBASIC0.88□□□□□ -2.27
HIST1H1AQ02539 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.88□□□□□ -2.27
HIST1H1AQ02539 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.88□□□□□ -2.27
HIST1H1AQ02539 MTCO1P44-201ENST00000441935 243 ntBASIC0.88□□□□□ -2.27
HIST1H1AQ02539 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.88□□□□□ -2.27
HIST1H1AQ02539 RNU7-95P-201ENST00000459222 64 ntBASIC0.88□□□□□ -2.27
HIST1H1AQ02539 RPL30P7-201ENST00000479312 323 ntBASIC0.88□□□□□ -2.27
HIST1H1AQ02539 AC087441.2-201ENST00000529141 262 ntBASIC0.88□□□□□ -2.27
HIST1H1AQ02539 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.88□□□□□ -2.27
HIST1H1AQ02539 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.88□□□□□ -2.27
HIST1H1AQ02539 AC125611.1-201ENST00000549563 229 ntBASIC0.88□□□□□ -2.27
HIST1H1AQ02539 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.88□□□□□ -2.27
HIST1H1AQ02539 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.88□□□□□ -2.27
HIST1H1AQ02539 AC097468.3-201ENST00000607956 456 ntBASIC0.88□□□□□ -2.27
HIST1H1AQ02539 AC009032.1-201ENST00000617574 431 ntBASIC0.88□□□□□ -2.27
HIST1H1AQ02539 AL353770.2-201ENST00000620024 78 ntBASIC0.88□□□□□ -2.27
HIST1H1AQ02539 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
HIST1H1AQ02539 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
HIST1H1AQ02539 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.87□□□□□ -2.27
HIST1H1AQ02539 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
HIST1H1AQ02539 MIR597-201ENST00000384968 97 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 ELOCP14-201ENST00000428070 331 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 AL590233.1-201ENST00000430017 456 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 ZNF965P-201ENST00000432501 817 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 ELOCP7-201ENST00000439968 331 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 RNU6-885P-201ENST00000516607 104 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 RN7SKP219-201ENST00000516825 296 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.87□□□□□ -2.27
HIST1H1AQ02539 AP003122.4-201ENST00000530980 758 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 RAB11AP2-201ENST00000545905 639 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.87□□□□□ -2.27
HIST1H1AQ02539 MRPS36P5-201ENST00000551909 298 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.87□□□□□ -2.27
HIST1H1AQ02539 EIF1AXP2-201ENST00000555940 413 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 AC015712.3-201ENST00000559380 164 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 MIR4295-201ENST00000585286 85 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 AC023043.2-201ENST00000589678 1026 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 AC011451.2-201ENST00000604303 598 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 AL158211.4-201ENST00000606988 584 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.87□□□□□ -2.27
HIST1H1AQ02539 AC099063.3-201ENST00000642066 185 ntBASIC0.87□□□□□ -2.27
HIST1H1AQ02539 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
HIST1H1AQ02539 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
HIST1H1AQ02539 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HIST1H1AQ02539 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.87□□□□□ -2.27
HIST1H1AQ02539 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
HIST1H1AQ02539 RNU1-58P-201ENST00000362413 163 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 Y_RNA.140-201ENST00000363474 103 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 RNA5SP99-201ENST00000364020 114 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 RNU6-439P-201ENST00000384188 106 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 SNORD14D-201ENST00000384390 87 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 MTCO2P31-201ENST00000402702 684 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 RNU2-28P-201ENST00000410457 189 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 RNA5SP100-201ENST00000410903 110 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 RNA5SP59-201ENST00000410922 110 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 TPMTP3-201ENST00000411928 735 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 CST2P1-201ENST00000425770 87 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 AC108667.1-201ENST00000428618 249 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.86□□□□□ -2.27
HIST1H1AQ02539 DYNLT3P2-201ENST00000442517 295 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 RPL39P29-201ENST00000447779 157 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 RPS29P29-201ENST00000456396 171 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.86□□□□□ -2.27
HIST1H1AQ02539 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.86□□□□□ -2.27
HIST1H1AQ02539 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.86□□□□□ -2.27
HIST1H1AQ02539 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.86□□□□□ -2.27
HIST1H1AQ02539 RPS3AP4-201ENST00000555161 764 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 AC012414.6-201ENST00000568241 401 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 ADAM3B-201ENST00000569937 840 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.86□□□□□ -2.27
HIST1H1AQ02539 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.86□□□□□ -2.27
HIST1H1AQ02539 BBIP1P1-201ENST00000602999 279 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 AC069304.2-201ENST00000605154 435 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 AC087045.1-201ENST00000605856 382 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 AC103810.9-201ENST00000606688 112 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 AL355472.4-201ENST00000610233 626 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 MIR6078-201ENST00000611069 100 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 uc_338.12-201ENST00000616344 181 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 AL596245.1-201ENST00000618994 362 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 AC080188.3-201ENST00000624842 748 ntBASIC0.86□□□□□ -2.27
HIST1H1AQ02539 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.86□□□□□ -2.27
HIST1H1AQ02539 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 263.6 ms