Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNU6-562P-201ENST00000362731 107 ntBASIC3.27□□□□□ -1.89
RAE1P78406 Y_RNA.58-201ENST00000362807 102 ntBASIC3.27□□□□□ -1.89
RAE1P78406 Y_RNA.67-201ENST00000362870 100 ntBASIC3.27□□□□□ -1.89
RAE1P78406 Y_RNA.154-201ENST00000363624 102 ntBASIC3.27□□□□□ -1.89
RAE1P78406 SNORD14B-201ENST00000364533 90 ntBASIC3.27□□□□□ -1.89
RAE1P78406 RNY3P1-201ENST00000365085 102 ntBASIC3.27□□□□□ -1.89
RAE1P78406 RNY3-201ENST00000365484 102 ntBASIC3.27□□□□□ -1.89
RAE1P78406 SNORD116-11-201ENST00000383882 92 ntBASIC3.27□□□□□ -1.89
RAE1P78406 Y_RNA.490-201ENST00000384413 102 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AL591034.1-201ENST00000407447 340 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AL592148.1-201ENST00000413568 445 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AC074085.1-201ENST00000413598 418 ntBASIC3.27□□□□□ -1.89
RAE1P78406 Z99755.1-201ENST00000414048 380 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.27□□□□□ -1.89
RAE1P78406 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.27□□□□□ -1.89
RAE1P78406 BRK1P2-201ENST00000442875 223 ntBASIC3.27□□□□□ -1.89
RAE1P78406 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.27□□□□□ -1.89
RAE1P78406 AC106707.2-201ENST00000484182 374 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AC139453.3-201ENST00000493276 369 ntBASIC3.27□□□□□ -1.89
RAE1P78406 HMGN1P13-201ENST00000505795 138 ntBASIC3.27□□□□□ -1.89
RAE1P78406 HMGB3P15-201ENST00000507326 574 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.27□□□□□ -1.89
RAE1P78406 RNU6-1332P-201ENST00000516666 104 ntBASIC3.27□□□□□ -1.89
RAE1P78406 SNORA31.19-201ENST00000517079 126 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AC025755.1-201ENST00000521306 278 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.27□□□□□ -1.89
RAE1P78406 SYF2P1-201ENST00000550658 413 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.27□□□□□ -1.89
RAE1P78406 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.27□□□□□ -1.89
RAE1P78406 AC007151.1-201ENST00000572774 483 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AC245389.1-201ENST00000605141 529 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AL050343.2-201ENST00000607338 280 ntBASIC3.27□□□□□ -1.89
RAE1P78406 FTX_3.1-201ENST00000610451 147 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AC135507.2-201ENST00000612443 309 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AL442067.2-201ENST00000614033 363 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AC039056.2-201ENST00000622261 511 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AC090574.1-201ENST00000623186 233 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.27□□□□□ -1.89
RAE1P78406 AC009093.8-201ENST00000641769 292 ntBASIC3.27□□□□□ -1.89
RAE1P78406 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.27□□□□□ -1.89
RAE1P78406 AP001148.1-201ENST00000624124 2359 ntBASIC3.27□□□□□ -1.89
RAE1P78406 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.27□□□□□ -1.89
RAE1P78406 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RAE1P78406 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.27□□□□□ -1.89
RAE1P78406 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RAE1P78406 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
RAE1P78406 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
RAE1P78406 FTLP6-201ENST00000355274 422 ntBASIC3.26□□□□□ -1.89
RAE1P78406 Y_RNA.324-201ENST00000365165 102 ntBASIC3.26□□□□□ -1.89
RAE1P78406 SNORD17-201ENST00000390930 237 ntBASIC3.26□□□□□ -1.89
RAE1P78406 FAT1P1-201ENST00000406588 507 ntBASIC3.26□□□□□ -1.89
RAE1P78406 Y_RNA.623-201ENST00000411128 95 ntBASIC3.26□□□□□ -1.89
RAE1P78406 RPL17P36-201ENST00000420302 549 ntBASIC3.26□□□□□ -1.89
RAE1P78406 AC098614.2-201ENST00000426040 255 ntBASIC3.26□□□□□ -1.89
RAE1P78406 RPL23AP82-202ENST00000427528 469 ntBASIC3.26□□□□□ -1.89
RAE1P78406 BX679664.1-201ENST00000434429 253 ntBASIC3.26□□□□□ -1.89
RAE1P78406 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.26□□□□□ -1.89
RAE1P78406 RBMY2UP-201ENST00000453474 324 ntBASIC3.26□□□□□ -1.89
RAE1P78406 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.26□□□□□ -1.89
RAE1P78406 AL583843.1-201ENST00000456070 346 ntBASIC3.26□□□□□ -1.89
RAE1P78406 Y_RNA.632-201ENST00000459189 102 ntBASIC3.26□□□□□ -1.89
RAE1P78406 RPL23AP62-201ENST00000463396 453 ntBASIC3.26□□□□□ -1.89
RAE1P78406 CENPBD1P1-201ENST00000464061 469 ntBASIC3.26□□□□□ -1.89
RAE1P78406 AC026801.1-201ENST00000497178 464 ntBASIC3.26□□□□□ -1.89
RAE1P78406 TRMT10BP1-201ENST00000519377 943 ntBASIC3.26□□□□□ -1.89
RAE1P78406 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RAE1P78406 HPRT1P3-201ENST00000539521 576 ntBASIC3.26□□□□□ -1.89
RAE1P78406 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.26□□□□□ -1.89
RAE1P78406 AC100830.2-201ENST00000581636 240 ntBASIC3.26□□□□□ -1.89
RAE1P78406 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.26□□□□□ -1.89
RAE1P78406 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.26□□□□□ -1.89
RAE1P78406 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.26□□□□□ -1.89
RAE1P78406 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.26□□□□□ -1.89
RAE1P78406 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
RAE1P78406 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.26□□□□□ -1.89
RAE1P78406 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
RAE1P78406 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.25□□□□□ -1.89
RAE1P78406 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RAE1P78406 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RAE1P78406 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RAE1P78406 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
RAE1P78406 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
RAE1P78406 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RAE1P78406 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RAE1P78406 RNA5SP197-201ENST00000363357 119 ntBASIC3.25□□□□□ -1.89
RAE1P78406 RNU6-384P-201ENST00000364900 104 ntBASIC3.25□□□□□ -1.89
RAE1P78406 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.25□□□□□ -1.89
RAE1P78406 AL359837.1-201ENST00000381357 287 ntBASIC3.25□□□□□ -1.89
RAE1P78406 Y_RNA.431-201ENST00000384086 102 ntBASIC3.25□□□□□ -1.89
RAE1P78406 RNU6-1297P-201ENST00000384415 104 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AP000567.1-201ENST00000406413 156 ntBASIC3.25□□□□□ -1.89
RAE1P78406 RN7SKP202-201ENST00000410439 330 ntBASIC3.25□□□□□ -1.89
RAE1P78406 RPL37P10-201ENST00000412884 288 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.25□□□□□ -1.89
RAE1P78406 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.25□□□□□ -1.89
RAE1P78406 RPL7P37-201ENST00000425095 738 ntBASIC3.25□□□□□ -1.89
RAE1P78406 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.25□□□□□ -1.89
RAE1P78406 HMGB1P9-201ENST00000429856 646 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AL627311.1-201ENST00000431514 115 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms