Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.2□□□□□ -2.06
CCNA1P78396 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.2□□□□□ -2.06
CCNA1P78396 RNU4-5P-201ENST00000607255 135 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 MIR4509-1-201ENST00000618224 94 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 AC091932.3-201ENST00000624223 323 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 Z75746.1-201ENST00000440243 2080 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCNA1P78396 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CCNA1P78396 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CCNA1P78396 UBE2L2-201ENST00000254302 429 ntBASIC2.19□□□□□ -2.06
CCNA1P78396 RNU4-68P-201ENST00000364314 141 ntBASIC2.19□□□□□ -2.06
CCNA1P78396 RNU6-1242P-201ENST00000391052 103 ntBASIC2.19□□□□□ -2.06
CCNA1P78396 MIR320C1-201ENST00000408566 88 ntBASIC2.19□□□□□ -2.06
CCNA1P78396 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.19□□□□□ -2.06
CCNA1P78396 EDDM3CP-201ENST00000415977 425 ntBASIC2.19□□□□□ -2.06
CCNA1P78396 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.19□□□□□ -2.06
CCNA1P78396 AC097463.2-201ENST00000421074 142 ntBASIC2.19□□□□□ -2.06
CCNA1P78396 AC108667.1-201ENST00000428618 249 ntBASIC2.19□□□□□ -2.06
CCNA1P78396 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.19□□□□□ -2.06
CCNA1P78396 USP9YP8-201ENST00000441913 500 ntBASIC2.19□□□□□ -2.06
CCNA1P78396 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.19□□□□□ -2.06
CCNA1P78396 RPL36AP48-201ENST00000485521 314 ntBASIC2.19□□□□□ -2.06
CCNA1P78396 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.19□□□□□ -2.06
CCNA1P78396 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.19□□□□□ -2.06
CCNA1P78396 FAM92A1P1-201ENST00000528023 890 ntBASIC2.19□□□□□ -2.06
CCNA1P78396 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.19□□□□□ -2.06
CCNA1P78396 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.19□□□□□ -2.06
CCNA1P78396 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.19□□□□□ -2.06
CCNA1P78396 AC009314.1-201ENST00000603871 304 ntBASIC2.19□□□□□ -2.06
CCNA1P78396 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.19□□□□□ -2.06
CCNA1P78396 AL391834.2-201ENST00000609982 546 ntBASIC2.19□□□□□ -2.06
CCNA1P78396 AL133445.2-201ENST00000611191 527 ntBASIC2.19□□□□□ -2.06
CCNA1P78396 AC108479.2-201ENST00000617314 601 ntBASIC2.19□□□□□ -2.06
CCNA1P78396 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.19□□□□□ -2.06
CCNA1P78396 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.18□□□□□ -2.06
CCNA1P78396 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.18□□□□□ -2.06
CCNA1P78396 AC099786.3-201ENST00000565735 1410 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCNA1P78396 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCNA1P78396 Y_RNA.4-201ENST00000362333 112 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CCNA1P78396 AL359634.1-202ENST00000404721 284 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 RNA5SP247-201ENST00000411181 105 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 USP9YP33-201ENST00000412220 421 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.18□□□□□ -2.06
CCNA1P78396 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.18□□□□□ -2.06
CCNA1P78396 USP9YP27-201ENST00000418455 438 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 EIF1AXP1-201ENST00000419267 435 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 AC092648.1-201ENST00000425870 423 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 ISCA1P6-201ENST00000427740 390 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 RPL7P34-201ENST00000433316 712 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 USP9YP35-201ENST00000435696 412 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.18□□□□□ -2.06
CCNA1P78396 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.18□□□□□ -2.06
CCNA1P78396 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.18□□□□□ -2.06
CCNA1P78396 AC022493.1-201ENST00000492984 337 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 AC134050.1-201ENST00000495088 933 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.18□□□□□ -2.06
CCNA1P78396 AC010587.2-201ENST00000511727 448 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 RNU6-1053P-201ENST00000515930 101 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 SNORA25.15-201ENST00000516487 89 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 RNA5SP137-201ENST00000516833 135 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.18□□□□□ -2.06
CCNA1P78396 GNAI2P1-201ENST00000541815 315 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.18□□□□□ -2.06
CCNA1P78396 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.18□□□□□ -2.06
CCNA1P78396 MIR3908-201ENST00000579798 126 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 MIR3683-201ENST00000580847 82 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 UBE2L4-201ENST00000587688 464 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.18□□□□□ -2.06
CCNA1P78396 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.18□□□□□ -2.06
CCNA1P78396 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.18□□□□□ -2.06
CCNA1P78396 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.18□□□□□ -2.06
CCNA1P78396 AL158801.5-201ENST00000623123 465 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 AC091953.2-201ENST00000623979 160 ntBASIC2.18□□□□□ -2.06
CCNA1P78396 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCNA1P78396 CKAP2P1-201ENST00000555477 2049 ntBASIC2.17□□□□□ -2.06
CCNA1P78396 ZNF29P-201ENST00000225587 168 ntBASIC2.17□□□□□ -2.06
CCNA1P78396 AL512604.1-201ENST00000404812 257 ntBASIC2.17□□□□□ -2.06
CCNA1P78396 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.17□□□□□ -2.06
CCNA1P78396 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.17□□□□□ -2.06
CCNA1P78396 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.17□□□□□ -2.06
CCNA1P78396 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.17□□□□□ -2.06
CCNA1P78396 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.17□□□□□ -2.06
CCNA1P78396 UBE2V1P12-201ENST00000503954 474 ntBASIC2.17□□□□□ -2.06
CCNA1P78396 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.17□□□□□ -2.06
CCNA1P78396 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.17□□□□□ -2.06
CCNA1P78396 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.17□□□□□ -2.06
CCNA1P78396 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.17□□□□□ -2.06
CCNA1P78396 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.17□□□□□ -2.06
CCNA1P78396 AC080013.3-201ENST00000606839 578 ntBASIC2.17□□□□□ -2.06
CCNA1P78396 AL139022.2-201ENST00000606934 443 ntBASIC2.17□□□□□ -2.06
CCNA1P78396 AC007038.2-201ENST00000608095 740 ntBASIC2.17□□□□□ -2.06
CCNA1P78396 AL627230.6-201ENST00000611129 280 ntBASIC2.17□□□□□ -2.06
CCNA1P78396 AL359851.1-201ENST00000569460 4997 ntBASIC2.17□□□□□ -2.06
CCNA1P78396 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
CCNA1P78396 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.16□□□□□ -2.06
CCNA1P78396 Y_RNA.164-201ENST00000363709 102 ntBASIC2.16□□□□□ -2.06
CCNA1P78396 RNA5SP190-201ENST00000365222 118 ntBASIC2.16□□□□□ -2.06
CCNA1P78396 SNORA51.11-201ENST00000384442 131 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms