Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AL158156.1-201ENST00000422509 473 ntBASIC0.71□□□□□ -2.3
RPS28P62857 AC104651.1-201ENST00000427559 735 ntBASIC0.71□□□□□ -2.3
RPS28P62857 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.71□□□□□ -2.3
RPS28P62857 UBE2V2P3-201ENST00000433562 437 ntBASIC0.71□□□□□ -2.3
RPS28P62857 RPL23AP76-201ENST00000441860 458 ntBASIC0.71□□□□□ -2.3
RPS28P62857 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.71□□□□□ -2.3
RPS28P62857 AL672167.3-201ENST00000465951 960 ntBASIC0.71□□□□□ -2.3
RPS28P62857 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.71□□□□□ -2.3
RPS28P62857 RNA5SP341-201ENST00000516261 117 ntBASIC0.71□□□□□ -2.3
RPS28P62857 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.71□□□□□ -2.3
RPS28P62857 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC0.71□□□□□ -2.3
RPS28P62857 UBTFL10-201ENST00000528532 562 ntBASIC0.71□□□□□ -2.3
RPS28P62857 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.71□□□□□ -2.3
RPS28P62857 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.71□□□□□ -2.3
RPS28P62857 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.71□□□□□ -2.3
RPS28P62857 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC0.71□□□□□ -2.3
RPS28P62857 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC0.71□□□□□ -2.3
RPS28P62857 AP002906.1-201ENST00000603405 233 ntBASIC0.71□□□□□ -2.3
RPS28P62857 AL391646.1-201ENST00000603860 190 ntBASIC0.71□□□□□ -2.3
RPS28P62857 AL023583.1-201ENST00000607518 1143 ntBASIC0.71□□□□□ -2.3
RPS28P62857 AC090970.3-201ENST00000612566 866 ntBASIC0.71□□□□□ -2.3
RPS28P62857 AC243773.3-201ENST00000613270 256 ntBASIC0.71□□□□□ -2.3
RPS28P62857 ATP5A1P2-202ENST00000616464 443 ntBASIC0.71□□□□□ -2.3
RPS28P62857 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC0.71□□□□□ -2.3
RPS28P62857 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC0.71□□□□□ -2.3
RPS28P62857 AC099063.3-201ENST00000642066 185 ntBASIC0.71□□□□□ -2.3
RPS28P62857 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
RPS28P62857 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
RPS28P62857 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
RPS28P62857 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.71□□□□□ -2.3
RPS28P62857 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.71□□□□□ -2.3
RPS28P62857 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC0.7□□□□□ -2.3
RPS28P62857 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.7□□□□□ -2.3
RPS28P62857 RNU6-968P-201ENST00000384076 107 ntBASIC0.7□□□□□ -2.3
RPS28P62857 RPL23AP32-201ENST00000395315 459 ntBASIC0.7□□□□□ -2.3
RPS28P62857 POLR2J4-204ENST00000418424 324 ntBASIC0.7□□□□□ -2.3
RPS28P62857 EIF1P1-201ENST00000421436 341 ntBASIC0.7□□□□□ -2.3
RPS28P62857 AL589872.1-201ENST00000426602 288 ntBASIC0.7□□□□□ -2.3
RPS28P62857 AC063976.3-201ENST00000426849 329 ntBASIC0.7□□□□□ -2.3
RPS28P62857 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.7□□□□□ -2.3
RPS28P62857 COX7BP2-201ENST00000437976 242 ntBASIC0.7□□□□□ -2.3
RPS28P62857 MTATP6P30-201ENST00000443540 664 ntBASIC0.7□□□□□ -2.3
RPS28P62857 FDX1P2-201ENST00000450769 375 ntBASIC0.7□□□□□ -2.3
RPS28P62857 S100A11P2-201ENST00000467589 312 ntBASIC0.7□□□□□ -2.3
RPS28P62857 RPL26P26-201ENST00000480251 434 ntBASIC0.7□□□□□ -2.3
RPS28P62857 RPL36AP21-201ENST00000490372 323 ntBASIC0.7□□□□□ -2.3
RPS28P62857 AC093259.1-201ENST00000509755 300 ntBASIC0.7□□□□□ -2.3
RPS28P62857 AC112198.4-201ENST00000515450 351 ntBASIC0.7□□□□□ -2.3
RPS28P62857 RNA5SP281-201ENST00000516504 135 ntBASIC0.7□□□□□ -2.3
RPS28P62857 RPL7P20-201ENST00000520308 745 ntBASIC0.7□□□□□ -2.3
RPS28P62857 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC0.7□□□□□ -2.3
RPS28P62857 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
RPS28P62857 MIR4661-201ENST00000582720 75 ntBASIC0.7□□□□□ -2.3
RPS28P62857 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC0.7□□□□□ -2.3
RPS28P62857 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.7□□□□□ -2.3
RPS28P62857 AC093732.2-201ENST00000607950 274 ntBASIC0.7□□□□□ -2.3
RPS28P62857 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.7□□□□□ -2.3
RPS28P62857 RNA5SP493-201ENST00000364115 91 ntBASIC0.69□□□□□ -2.3
RPS28P62857 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
RPS28P62857 MIR34A-201ENST00000385130 110 ntBASIC0.69□□□□□ -2.3
RPS28P62857 MIR513A1-201ENST00000385138 129 ntBASIC0.69□□□□□ -2.3
RPS28P62857 RNU6-932P-201ENST00000391108 106 ntBASIC0.69□□□□□ -2.3
RPS28P62857 TPMTP2-201ENST00000414372 726 ntBASIC0.69□□□□□ -2.3
RPS28P62857 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC0.69□□□□□ -2.3
RPS28P62857 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.69□□□□□ -2.3
RPS28P62857 AL050321.1-201ENST00000432363 400 ntBASIC0.69□□□□□ -2.3
RPS28P62857 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC0.69□□□□□ -2.3
RPS28P62857 UBE2V1P8-201ENST00000437166 265 ntBASIC0.69□□□□□ -2.3
RPS28P62857 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.69□□□□□ -2.3
RPS28P62857 SNRPGP13-201ENST00000442212 177 ntBASIC0.69□□□□□ -2.3
RPS28P62857 GXYLT1P1-201ENST00000446657 490 ntBASIC0.69□□□□□ -2.3
RPS28P62857 AC012308.1-201ENST00000451232 178 ntBASIC0.69□□□□□ -2.3
RPS28P62857 USP9YP10-201ENST00000454868 628 ntBASIC0.69□□□□□ -2.3
RPS28P62857 AMD1P1-201ENST00000457220 922 ntBASIC0.69□□□□□ -2.3
RPS28P62857 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC0.69□□□□□ -2.3
RPS28P62857 AC108078.1-201ENST00000508073 725 ntBASIC0.69□□□□□ -2.3
RPS28P62857 RNU6-991P-201ENST00000516168 107 ntBASIC0.69□□□□□ -2.3
RPS28P62857 RN7SKP157-201ENST00000516174 282 ntBASIC0.69□□□□□ -2.3
RPS28P62857 SCARNA16.2-201ENST00000516520 172 ntBASIC0.69□□□□□ -2.3
RPS28P62857 RNU1-45P-201ENST00000517191 141 ntBASIC0.69□□□□□ -2.3
RPS28P62857 AC023632.1-201ENST00000518463 375 ntBASIC0.69□□□□□ -2.3
RPS28P62857 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.69□□□□□ -2.3
RPS28P62857 AP002770.2-201ENST00000543613 532 ntBASIC0.69□□□□□ -2.3
RPS28P62857 AL450270.1-201ENST00000606160 391 ntBASIC0.69□□□□□ -2.3
RPS28P62857 OR2AS2P-201ENST00000606902 342 ntBASIC0.69□□□□□ -2.3
RPS28P62857 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.69□□□□□ -2.3
RPS28P62857 uc_338.15-201ENST00000615470 191 ntBASIC0.69□□□□□ -2.3
RPS28P62857 uc_338.12-201ENST00000616344 181 ntBASIC0.69□□□□□ -2.3
RPS28P62857 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.69□□□□□ -2.3
RPS28P62857 CTSLP2-204ENST00000629029 392 ntBASIC0.69□□□□□ -2.3
RPS28P62857 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
RPS28P62857 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
RPS28P62857 RNU6-858P-201ENST00000362436 107 ntBASIC0.68□□□□□ -2.3
RPS28P62857 RNU6-1010P-201ENST00000362757 107 ntBASIC0.68□□□□□ -2.3
RPS28P62857 RNU6-216P-201ENST00000363282 104 ntBASIC0.68□□□□□ -2.3
RPS28P62857 RNU6-112P-201ENST00000363599 104 ntBASIC0.68□□□□□ -2.3
RPS28P62857 RNU6-944P-201ENST00000364023 107 ntBASIC0.68□□□□□ -2.3
RPS28P62857 RNU6-203P-201ENST00000384038 104 ntBASIC0.68□□□□□ -2.3
RPS28P62857 RNU6-481P-201ENST00000384194 107 ntBASIC0.68□□□□□ -2.3
RPS28P62857 AL139397.2-201ENST00000404529 772 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms