Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
USP46P62068 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP46P62068 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USP46P62068 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USP46P62068 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
USP46P62068 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
USP46P62068 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.28□□□□□ -1.56
USP46P62068 Y_RNA.75-201ENST00000362927 97 ntBASIC5.28□□□□□ -1.56
USP46P62068 Y_RNA.101-201ENST00000363154 102 ntBASIC5.28□□□□□ -1.56
USP46P62068 RNA5SP205-201ENST00000364653 136 ntBASIC5.28□□□□□ -1.56
USP46P62068 RNU6-215P-201ENST00000365169 102 ntBASIC5.28□□□□□ -1.56
USP46P62068 MIR518D-201ENST00000385014 87 ntBASIC5.28□□□□□ -1.56
USP46P62068 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP46P62068 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.28□□□□□ -1.56
USP46P62068 AL049745.1-201ENST00000433953 286 ntBASIC5.28□□□□□ -1.56
USP46P62068 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.28□□□□□ -1.56
USP46P62068 RN7SL319P-201ENST00000480656 221 ntBASIC5.28□□□□□ -1.56
USP46P62068 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.28□□□□□ -1.56
USP46P62068 RN7SKP122-201ENST00000515923 296 ntBASIC5.28□□□□□ -1.56
USP46P62068 RNU6-155P-201ENST00000516347 100 ntBASIC5.28□□□□□ -1.56
USP46P62068 RNU1-103P-201ENST00000516502 125 ntBASIC5.28□□□□□ -1.56
USP46P62068 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.28□□□□□ -1.56
USP46P62068 AC233702.2-202ENST00000562547 291 ntBASIC5.28□□□□□ -1.56
USP46P62068 AC136624.4-201ENST00000573044 370 ntBASIC5.28□□□□□ -1.56
USP46P62068 MIR5571-201ENST00000577998 113 ntBASIC5.28□□□□□ -1.56
USP46P62068 DEFB117-201ENST00000602356 141 ntBASIC5.28□□□□□ -1.56
USP46P62068 AL356157.2-201ENST00000605122 111 ntBASIC5.28□□□□□ -1.56
USP46P62068 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
USP46P62068 AC112198.2-201ENST00000426589 6996 ntBASIC5.28□□□□□ -1.56
USP46P62068 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP46P62068 AC008568.2-201ENST00000623862 2313 ntBASIC5.28□□□□□ -1.56
USP46P62068 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
USP46P62068 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USP46P62068 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USP46P62068 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP46P62068 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.27□□□□□ -1.57
USP46P62068 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
USP46P62068 SNORD115-8-201ENST00000363856 82 ntBASIC5.27□□□□□ -1.57
USP46P62068 SNORD115-38-201ENST00000365037 82 ntBASIC5.27□□□□□ -1.57
USP46P62068 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USP46P62068 Y_RNA.498-201ENST00000384460 102 ntBASIC5.27□□□□□ -1.57
USP46P62068 SNORA40-201ENST00000388090 126 ntBASIC5.27□□□□□ -1.57
USP46P62068 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
USP46P62068 AL035461.1-201ENST00000421490 332 ntBASIC5.27□□□□□ -1.57
USP46P62068 MARK2P15-201ENST00000432204 2186 ntBASIC5.27□□□□□ -1.57
USP46P62068 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.27□□□□□ -1.57
USP46P62068 AL772161.1-201ENST00000439130 476 ntBASIC5.27□□□□□ -1.57
USP46P62068 RPS29P9-201ENST00000440360 171 ntBASIC5.27□□□□□ -1.57
USP46P62068 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.27□□□□□ -1.57
USP46P62068 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.27□□□□□ -1.57
USP46P62068 AC112498.1-201ENST00000444401 332 ntBASIC5.27□□□□□ -1.57
USP46P62068 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.27□□□□□ -1.57
USP46P62068 AC016632.1-201ENST00000503994 196 ntBASIC5.27□□□□□ -1.57
USP46P62068 HMGB1P22-201ENST00000505315 124 ntBASIC5.27□□□□□ -1.57
USP46P62068 Y_RNA.719-201ENST00000517156 106 ntBASIC5.27□□□□□ -1.57
USP46P62068 AC090281.1-201ENST00000523019 276 ntBASIC5.27□□□□□ -1.57
USP46P62068 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.27□□□□□ -1.57
USP46P62068 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
USP46P62068 AC018448.1-201ENST00000552843 316 ntBASIC5.27□□□□□ -1.57
USP46P62068 MIR548X2-201ENST00000579776 100 ntBASIC5.27□□□□□ -1.57
USP46P62068 AC004467.1-201ENST00000615678 330 ntBASIC5.27□□□□□ -1.57
USP46P62068 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.27□□□□□ -1.57
USP46P62068 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP46P62068 AC104623.2-202ENST00000623477 4002 ntBASIC5.27□□□□□ -1.57
USP46P62068 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
USP46P62068 AC010332.2-201ENST00000613083 1904 ntBASIC5.27□□□□□ -1.57
USP46P62068 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
USP46P62068 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
USP46P62068 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
USP46P62068 AL672167.1-204ENST00000641875 3017 ntBASIC5.26□□□□□ -1.57
USP46P62068 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.26□□□□□ -1.57
USP46P62068 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.26□□□□□ -1.57
USP46P62068 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
USP46P62068 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
USP46P62068 Y_RNA.121-201ENST00000363309 113 ntBASIC5.26□□□□□ -1.57
USP46P62068 Y_RNA.273-201ENST00000364703 102 ntBASIC5.26□□□□□ -1.57
USP46P62068 RNU6-1181P-201ENST00000384191 106 ntBASIC5.26□□□□□ -1.57
USP46P62068 SNORA70.10-201ENST00000384515 134 ntBASIC5.26□□□□□ -1.57
USP46P62068 MIR124-3-201ENST00000384866 87 ntBASIC5.26□□□□□ -1.57
USP46P62068 U3.32-201ENST00000408116 212 ntBASIC5.26□□□□□ -1.57
USP46P62068 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.26□□□□□ -1.57
USP46P62068 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.26□□□□□ -1.57
USP46P62068 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.26□□□□□ -1.57
USP46P62068 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.26□□□□□ -1.57
USP46P62068 H2AFZP5-201ENST00000446960 382 ntBASIC5.26□□□□□ -1.57
USP46P62068 AC114982.1-201ENST00000469402 321 ntBASIC5.26□□□□□ -1.57
USP46P62068 AL121594.1-201ENST00000475906 575 ntBASIC5.26□□□□□ -1.57
USP46P62068 AC097462.2-201ENST00000504623 481 ntBASIC5.26□□□□□ -1.57
USP46P62068 SNORA31.8-201ENST00000516327 108 ntBASIC5.26□□□□□ -1.57
USP46P62068 AL021997.2-201ENST00000615674 271 ntBASIC5.26□□□□□ -1.57
USP46P62068 AC091932.3-201ENST00000624223 323 ntBASIC5.26□□□□□ -1.57
USP46P62068 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.26□□□□□ -1.57
USP46P62068 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.26□□□□□ -1.57
USP46P62068 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP46P62068 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP46P62068 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP46P62068 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.26□□□□□ -1.57
USP46P62068 MTND5P35-201ENST00000557537 1720 ntBASIC5.26□□□□□ -1.57
USP46P62068 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP46P62068 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms