Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.62□□□□□ -1.99
LMO4P61968 EIF4BP1-201ENST00000554881 351 ntBASIC2.62□□□□□ -1.99
LMO4P61968 AL118558.2-201ENST00000556294 238 ntBASIC2.62□□□□□ -1.99
LMO4P61968 AC020661.2-201ENST00000560114 134 ntBASIC2.62□□□□□ -1.99
LMO4P61968 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.62□□□□□ -1.99
LMO4P61968 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.62□□□□□ -1.99
LMO4P61968 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.62□□□□□ -1.99
LMO4P61968 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.62□□□□□ -1.99
LMO4P61968 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.62□□□□□ -1.99
LMO4P61968 AP001836.1-201ENST00000604675 523 ntBASIC2.62□□□□□ -1.99
LMO4P61968 AL360085.1-201ENST00000604713 532 ntBASIC2.62□□□□□ -1.99
LMO4P61968 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.62□□□□□ -1.99
LMO4P61968 AL034351.1-201ENST00000605288 668 ntBASIC2.62□□□□□ -1.99
LMO4P61968 MIR6076-201ENST00000617521 113 ntBASIC2.62□□□□□ -1.99
LMO4P61968 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.62□□□□□ -1.99
LMO4P61968 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
LMO4P61968 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
LMO4P61968 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LMO4P61968 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.62□□□□□ -1.99
LMO4P61968 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.62□□□□□ -1.99
LMO4P61968 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
LMO4P61968 AC058791.1-201ENST00000608412 3198 ntBASIC2.62□□□□□ -1.99
LMO4P61968 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.62□□□□□ -1.99
LMO4P61968 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LMO4P61968 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
LMO4P61968 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LMO4P61968 PWAR6-201ENST00000552334 4618 ntBASIC2.61□□□□□ -1.99
LMO4P61968 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
LMO4P61968 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.61□□□□□ -1.99
LMO4P61968 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.61□□□□□ -1.99
LMO4P61968 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LMO4P61968 AC073343.1-201ENST00000328239 651 ntBASIC2.61□□□□□ -1.99
LMO4P61968 U3.12-201ENST00000364498 214 ntBASIC2.61□□□□□ -1.99
LMO4P61968 RNU1-140P-201ENST00000365040 165 ntBASIC2.61□□□□□ -1.99
LMO4P61968 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LMO4P61968 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LMO4P61968 Y_RNA.384-201ENST00000383909 102 ntBASIC2.61□□□□□ -1.99
LMO4P61968 Y_RNA.387-201ENST00000383918 102 ntBASIC2.61□□□□□ -1.99
LMO4P61968 SNORA1.3-201ENST00000384676 136 ntBASIC2.61□□□□□ -1.99
LMO4P61968 SNORD15B-201ENST00000384714 146 ntBASIC2.61□□□□□ -1.99
LMO4P61968 RNU6-278P-201ENST00000390945 109 ntBASIC2.61□□□□□ -1.99
LMO4P61968 RPL30P2-201ENST00000414021 291 ntBASIC2.61□□□□□ -1.99
LMO4P61968 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.61□□□□□ -1.99
LMO4P61968 AL590383.1-201ENST00000428602 75 ntBASIC2.61□□□□□ -1.99
LMO4P61968 AL356867.1-201ENST00000429623 299 ntBASIC2.61□□□□□ -1.99
LMO4P61968 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.61□□□□□ -1.99
LMO4P61968 NDUFB4P6-201ENST00000436819 366 ntBASIC2.61□□□□□ -1.99
LMO4P61968 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.61□□□□□ -1.99
LMO4P61968 HMGB3P11-201ENST00000440127 604 ntBASIC2.61□□□□□ -1.99
LMO4P61968 AC005094.1-201ENST00000440420 368 ntBASIC2.61□□□□□ -1.99
LMO4P61968 TXNP1-201ENST00000441872 371 ntBASIC2.61□□□□□ -1.99
LMO4P61968 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.61□□□□□ -1.99
LMO4P61968 NIPA2P5-201ENST00000452282 464 ntBASIC2.61□□□□□ -1.99
LMO4P61968 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.61□□□□□ -1.99
LMO4P61968 AL136097.1-201ENST00000456945 913 ntBASIC2.61□□□□□ -1.99
LMO4P61968 RNU7-66P-201ENST00000459469 62 ntBASIC2.61□□□□□ -1.99
LMO4P61968 RPL23AP11-201ENST00000475260 469 ntBASIC2.61□□□□□ -1.99
LMO4P61968 HMGN2P13-201ENST00000476476 274 ntBASIC2.61□□□□□ -1.99
LMO4P61968 RPL30P14-201ENST00000482744 348 ntBASIC2.61□□□□□ -1.99
LMO4P61968 RNU1-103P-201ENST00000516502 125 ntBASIC2.61□□□□□ -1.99
LMO4P61968 RNA5SP503-201ENST00000517047 117 ntBASIC2.61□□□□□ -1.99
LMO4P61968 RNU6-711P-201ENST00000517255 106 ntBASIC2.61□□□□□ -1.99
LMO4P61968 RNU6-840P-201ENST00000517275 65 ntBASIC2.61□□□□□ -1.99
LMO4P61968 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.61□□□□□ -1.99
LMO4P61968 AC022080.3-201ENST00000544433 482 ntBASIC2.61□□□□□ -1.99
LMO4P61968 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.61□□□□□ -1.99
LMO4P61968 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.61□□□□□ -1.99
LMO4P61968 AC093249.1-201ENST00000567049 203 ntBASIC2.61□□□□□ -1.99
LMO4P61968 MIR5583-1-201ENST00000580941 59 ntBASIC2.61□□□□□ -1.99
LMO4P61968 MIR4293-201ENST00000584305 78 ntBASIC2.61□□□□□ -1.99
LMO4P61968 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.61□□□□□ -1.99
LMO4P61968 CTHRC1P1-201ENST00000605383 469 ntBASIC2.61□□□□□ -1.99
LMO4P61968 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.61□□□□□ -1.99
LMO4P61968 AC099506.2-201ENST00000623074 221 ntBASIC2.61□□□□□ -1.99
LMO4P61968 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.61□□□□□ -1.99
LMO4P61968 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LMO4P61968 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.61□□□□□ -1.99
LMO4P61968 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
LMO4P61968 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
LMO4P61968 HSPA8P1-201ENST00000425843 1833 ntBASIC2.61□□□□□ -1.99
LMO4P61968 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
LMO4P61968 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.6□□□□□ -1.99
LMO4P61968 RNU6-179P-201ENST00000363350 107 ntBASIC2.6□□□□□ -1.99
LMO4P61968 Y_RNA.167-201ENST00000363735 109 ntBASIC2.6□□□□□ -1.99
LMO4P61968 RNU6-188P-201ENST00000364207 107 ntBASIC2.6□□□□□ -1.99
LMO4P61968 Y_RNA.373-201ENST00000365600 103 ntBASIC2.6□□□□□ -1.99
LMO4P61968 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
LMO4P61968 SNORA44-201ENST00000384584 132 ntBASIC2.6□□□□□ -1.99
LMO4P61968 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
LMO4P61968 U3.26-201ENST00000391236 204 ntBASIC2.6□□□□□ -1.99
LMO4P61968 RNU2-29P-201ENST00000410423 189 ntBASIC2.6□□□□□ -1.99
LMO4P61968 RN7SKP220-201ENST00000410611 288 ntBASIC2.6□□□□□ -1.99
LMO4P61968 RNA5SP107-201ENST00000411358 122 ntBASIC2.6□□□□□ -1.99
LMO4P61968 RNU6-516P-201ENST00000411381 104 ntBASIC2.6□□□□□ -1.99
LMO4P61968 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.6□□□□□ -1.99
LMO4P61968 OR6C66P-201ENST00000414917 930 ntBASIC2.6□□□□□ -1.99
LMO4P61968 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.6□□□□□ -1.99
LMO4P61968 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.6□□□□□ -1.99
LMO4P61968 PPP1R11P2-201ENST00000423543 382 ntBASIC2.6□□□□□ -1.99
LMO4P61968 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms