Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 RPL30P7-201ENST00000479312 323 ntBASIC1.12□□□□□ -2.23
VBP1P61758 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.12□□□□□ -2.23
VBP1P61758 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.12□□□□□ -2.23
VBP1P61758 AC008628.1-201ENST00000508663 265 ntBASIC1.12□□□□□ -2.23
VBP1P61758 AC010486.1-201ENST00000511793 424 ntBASIC1.12□□□□□ -2.23
VBP1P61758 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.12□□□□□ -2.23
VBP1P61758 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.12□□□□□ -2.23
VBP1P61758 AP003122.4-201ENST00000530980 758 ntBASIC1.12□□□□□ -2.23
VBP1P61758 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.12□□□□□ -2.23
VBP1P61758 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.12□□□□□ -2.23
VBP1P61758 AC023813.2-201ENST00000564321 469 ntBASIC1.12□□□□□ -2.23
VBP1P61758 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.12□□□□□ -2.23
VBP1P61758 MIR4648-201ENST00000580107 72 ntBASIC1.12□□□□□ -2.23
VBP1P61758 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.12□□□□□ -2.23
VBP1P61758 BNIP3P33-201ENST00000598912 569 ntBASIC1.12□□□□□ -2.23
VBP1P61758 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.12□□□□□ -2.23
VBP1P61758 BNIP3P27-201ENST00000599991 412 ntBASIC1.12□□□□□ -2.23
VBP1P61758 AC005229.3-201ENST00000603438 323 ntBASIC1.12□□□□□ -2.23
VBP1P61758 AC091834.1-201ENST00000614543 472 ntBASIC1.12□□□□□ -2.23
VBP1P61758 AC090517.3-201ENST00000625170 141 ntBASIC1.12□□□□□ -2.23
VBP1P61758 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
VBP1P61758 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
VBP1P61758 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
VBP1P61758 RNU6-271P-201ENST00000363858 105 ntBASIC1.11□□□□□ -2.23
VBP1P61758 RNU6-60P-201ENST00000364792 103 ntBASIC1.11□□□□□ -2.23
VBP1P61758 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
VBP1P61758 SNORA22-201ENST00000383907 134 ntBASIC1.11□□□□□ -2.23
VBP1P61758 SNORA22C-201ENST00000384614 134 ntBASIC1.11□□□□□ -2.23
VBP1P61758 MTCO2P5-201ENST00000422621 426 ntBASIC1.11□□□□□ -2.23
VBP1P61758 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.11□□□□□ -2.23
VBP1P61758 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.11□□□□□ -2.23
VBP1P61758 RNU1-123P-201ENST00000458950 160 ntBASIC1.11□□□□□ -2.23
VBP1P61758 RPS26P55-201ENST00000471178 356 ntBASIC1.11□□□□□ -2.23
VBP1P61758 AC108729.1-201ENST00000487812 947 ntBASIC1.11□□□□□ -2.23
VBP1P61758 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.11□□□□□ -2.23
VBP1P61758 PTP4A1P4-201ENST00000512479 322 ntBASIC1.11□□□□□ -2.23
VBP1P61758 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.11□□□□□ -2.23
VBP1P61758 MTND5P13-201ENST00000513046 1079 ntBASIC1.11□□□□□ -2.23
VBP1P61758 snoZ278.1-201ENST00000517059 112 ntBASIC1.11□□□□□ -2.23
VBP1P61758 ACA59.2-201ENST00000517061 156 ntBASIC1.11□□□□□ -2.23
VBP1P61758 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
VBP1P61758 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.11□□□□□ -2.23
VBP1P61758 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.11□□□□□ -2.23
VBP1P61758 MIR4637-201ENST00000582405 84 ntBASIC1.11□□□□□ -2.23
VBP1P61758 AC091057.3-201ENST00000602684 733 ntBASIC1.11□□□□□ -2.23
VBP1P61758 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.11□□□□□ -2.23
VBP1P61758 AC009237.15-201ENST00000610252 501 ntBASIC1.11□□□□□ -2.23
VBP1P61758 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.11□□□□□ -2.23
VBP1P61758 MTND5P9-201ENST00000503854 1755 ntBASIC1.11□□□□□ -2.23
VBP1P61758 NACAP2-201ENST00000318548 624 ntBASIC1.1□□□□□ -2.23
VBP1P61758 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.1□□□□□ -2.23
VBP1P61758 RNU6-1164P-201ENST00000364428 107 ntBASIC1.1□□□□□ -2.23
VBP1P61758 RNU6-481P-201ENST00000384194 107 ntBASIC1.1□□□□□ -2.23
VBP1P61758 MIR483-201ENST00000385070 76 ntBASIC1.1□□□□□ -2.23
VBP1P61758 RNU2-48P-201ENST00000410694 191 ntBASIC1.1□□□□□ -2.23
VBP1P61758 AC114878.1-201ENST00000441166 358 ntBASIC1.1□□□□□ -2.23
VBP1P61758 RPL7P36-201ENST00000444633 681 ntBASIC1.1□□□□□ -2.23
VBP1P61758 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.1□□□□□ -2.23
VBP1P61758 AC068587.2-201ENST00000478386 781 ntBASIC1.1□□□□□ -2.23
VBP1P61758 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.1□□□□□ -2.23
VBP1P61758 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.1□□□□□ -2.23
VBP1P61758 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.1□□□□□ -2.23
VBP1P61758 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.1□□□□□ -2.23
VBP1P61758 AL390208.1-201ENST00000605885 644 ntBASIC1.1□□□□□ -2.23
VBP1P61758 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.1□□□□□ -2.23
VBP1P61758 MIR6845-201ENST00000613182 61 ntBASIC1.1□□□□□ -2.23
VBP1P61758 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VBP1P61758 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VBP1P61758 AC092125.1-201ENST00000562568 1995 ntBASIC1.1□□□□□ -2.23
VBP1P61758 AC138393.1-203ENST00000327086 343 ntBASIC1.09□□□□□ -2.23
VBP1P61758 RNU6-1167P-201ENST00000363227 94 ntBASIC1.09□□□□□ -2.23
VBP1P61758 Y_RNA.234-201ENST00000364409 97 ntBASIC1.09□□□□□ -2.23
VBP1P61758 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.09□□□□□ -2.23
VBP1P61758 TAF13P2-201ENST00000416876 286 ntBASIC1.09□□□□□ -2.23
VBP1P61758 NCOR1P3-201ENST00000420479 303 ntBASIC1.09□□□□□ -2.23
VBP1P61758 AL139421.1-201ENST00000423010 169 ntBASIC1.09□□□□□ -2.23
VBP1P61758 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.09□□□□□ -2.23
VBP1P61758 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.09□□□□□ -2.23
VBP1P61758 RPL36AP53-201ENST00000432891 316 ntBASIC1.09□□□□□ -2.23
VBP1P61758 AL135790.2-201ENST00000437701 267 ntBASIC1.09□□□□□ -2.23
VBP1P61758 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.09□□□□□ -2.23
VBP1P61758 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC1.09□□□□□ -2.23
VBP1P61758 RPL21P47-201ENST00000483696 477 ntBASIC1.09□□□□□ -2.23
VBP1P61758 MTCYBP43-201ENST00000513621 740 ntBASIC1.09□□□□□ -2.23
VBP1P61758 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.09□□□□□ -2.23
VBP1P61758 RNU6-678P-201ENST00000516832 109 ntBASIC1.09□□□□□ -2.23
VBP1P61758 COPS8P3-201ENST00000526024 482 ntBASIC1.09□□□□□ -2.23
VBP1P61758 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.09□□□□□ -2.23
VBP1P61758 MIR4435-1-201ENST00000582552 80 ntBASIC1.09□□□□□ -2.23
VBP1P61758 RPL30P11-203ENST00000598995 310 ntBASIC1.09□□□□□ -2.23
VBP1P61758 HSPE1P19-201ENST00000603327 295 ntBASIC1.09□□□□□ -2.23
VBP1P61758 AC123912.5-201ENST00000605470 343 ntBASIC1.09□□□□□ -2.23
VBP1P61758 AC009268.2-201ENST00000621925 457 ntBASIC1.09□□□□□ -2.23
VBP1P61758 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
VBP1P61758 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.08□□□□□ -2.24
VBP1P61758 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
VBP1P61758 SNORA62.1-201ENST00000364287 154 ntBASIC1.08□□□□□ -2.24
VBP1P61758 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
VBP1P61758 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.08□□□□□ -2.24
VBP1P61758 DHFRP6-201ENST00000401776 268 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms