Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RNU1-100P-201ENST00000365255 165 ntBASIC2.49□□□□□ -2.01
SRP54P61011 XGY1-201ENST00000381172 446 ntBASIC2.49□□□□□ -2.01
SRP54P61011 Z98749.2-208ENST00000381646 500 ntBASIC2.49□□□□□ -2.01
SRP54P61011 SNORA67.4-201ENST00000384688 142 ntBASIC2.49□□□□□ -2.01
SRP54P61011 SNORA80E-201ENST00000384744 137 ntBASIC2.49□□□□□ -2.01
SRP54P61011 MIR147B-201ENST00000390185 80 ntBASIC2.49□□□□□ -2.01
SRP54P61011 RNA5SP210-201ENST00000391034 120 ntBASIC2.49□□□□□ -2.01
SRP54P61011 RNU2-8P-201ENST00000410727 190 ntBASIC2.49□□□□□ -2.01
SRP54P61011 RNU4-72P-201ENST00000410754 173 ntBASIC2.49□□□□□ -2.01
SRP54P61011 AC009963.1-201ENST00000417265 157 ntBASIC2.49□□□□□ -2.01
SRP54P61011 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.49□□□□□ -2.01
SRP54P61011 MYL8P-204ENST00000431574 518 ntBASIC2.49□□□□□ -2.01
SRP54P61011 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.49□□□□□ -2.01
SRP54P61011 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.49□□□□□ -2.01
SRP54P61011 UBE2D3P4-201ENST00000441973 436 ntBASIC2.49□□□□□ -2.01
SRP54P61011 USP9YP15-201ENST00000442391 422 ntBASIC2.49□□□□□ -2.01
SRP54P61011 MRPL50P4-201ENST00000446432 475 ntBASIC2.49□□□□□ -2.01
SRP54P61011 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.49□□□□□ -2.01
SRP54P61011 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.49□□□□□ -2.01
SRP54P61011 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.49□□□□□ -2.01
SRP54P61011 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.49□□□□□ -2.01
SRP54P61011 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.49□□□□□ -2.01
SRP54P61011 RNU6-572P-201ENST00000516724 80 ntBASIC2.49□□□□□ -2.01
SRP54P61011 SNORA31.19-201ENST00000517079 126 ntBASIC2.49□□□□□ -2.01
SRP54P61011 AC025755.1-201ENST00000521306 278 ntBASIC2.49□□□□□ -2.01
SRP54P61011 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.49□□□□□ -2.01
SRP54P61011 AL157871.3-201ENST00000557231 293 ntBASIC2.49□□□□□ -2.01
SRP54P61011 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.49□□□□□ -2.01
SRP54P61011 AC023824.2-201ENST00000566185 400 ntBASIC2.49□□□□□ -2.01
SRP54P61011 MIR1273C-201ENST00000578669 77 ntBASIC2.49□□□□□ -2.01
SRP54P61011 MIR3199-1-201ENST00000582434 88 ntBASIC2.49□□□□□ -2.01
SRP54P61011 HMGN1P30-201ENST00000589286 268 ntBASIC2.49□□□□□ -2.01
SRP54P61011 AL451064.1-201ENST00000607718 471 ntBASIC2.49□□□□□ -2.01
SRP54P61011 AC013412.1-201ENST00000610687 192 ntBASIC2.49□□□□□ -2.01
SRP54P61011 AC025034.2-201ENST00000623264 286 ntBASIC2.49□□□□□ -2.01
SRP54P61011 AF246928.1-201ENST00000623768 87 ntBASIC2.49□□□□□ -2.01
SRP54P61011 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SRP54P61011 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SRP54P61011 MTND4P4-201ENST00000439033 1366 ntBASIC2.49□□□□□ -2.01
SRP54P61011 RNU6-748P-201ENST00000384648 107 ntBASIC2.48□□□□□ -2.01
SRP54P61011 RNU6-1072P-201ENST00000384703 107 ntBASIC2.48□□□□□ -2.01
SRP54P61011 RNU6-443P-201ENST00000384780 107 ntBASIC2.48□□□□□ -2.01
SRP54P61011 MIR144-201ENST00000384886 86 ntBASIC2.48□□□□□ -2.01
SRP54P61011 RNU6-220P-201ENST00000390919 107 ntBASIC2.48□□□□□ -2.01
SRP54P61011 SNORA40C-201ENST00000391285 128 ntBASIC2.48□□□□□ -2.01
SRP54P61011 Y_RNA.598-201ENST00000410480 95 ntBASIC2.48□□□□□ -2.01
SRP54P61011 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.48□□□□□ -2.01
SRP54P61011 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.48□□□□□ -2.01
SRP54P61011 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.48□□□□□ -2.01
SRP54P61011 AL589872.1-201ENST00000426602 288 ntBASIC2.48□□□□□ -2.01
SRP54P61011 AL078601.1-201ENST00000444542 271 ntBASIC2.48□□□□□ -2.01
SRP54P61011 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.48□□□□□ -2.01
SRP54P61011 AC092001.1-201ENST00000453012 261 ntBASIC2.48□□□□□ -2.01
SRP54P61011 KATNBL1P6-201ENST00000453433 915 ntBASIC2.48□□□□□ -2.01
SRP54P61011 CACYBPP2-201ENST00000453625 678 ntBASIC2.48□□□□□ -2.01
SRP54P61011 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.48□□□□□ -2.01
SRP54P61011 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.48□□□□□ -2.01
SRP54P61011 AC090096.1-201ENST00000489168 390 ntBASIC2.48□□□□□ -2.01
SRP54P61011 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.48□□□□□ -2.01
SRP54P61011 Y_RNA.672-201ENST00000516289 104 ntBASIC2.48□□□□□ -2.01
SRP54P61011 SCARNA3-201ENST00000517097 143 ntBASIC2.48□□□□□ -2.01
SRP54P61011 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.48□□□□□ -2.01
SRP54P61011 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.48□□□□□ -2.01
SRP54P61011 AP002770.2-201ENST00000543613 532 ntBASIC2.48□□□□□ -2.01
SRP54P61011 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.48□□□□□ -2.01
SRP54P61011 RPL21P5-201ENST00000554662 472 ntBASIC2.48□□□□□ -2.01
SRP54P61011 MIR6895-201ENST00000613497 78 ntBASIC2.48□□□□□ -2.01
SRP54P61011 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.48□□□□□ -2.01
SRP54P61011 AL359854.1-201ENST00000614203 1594 ntBASIC2.48□□□□□ -2.01
SRP54P61011 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SRP54P61011 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SRP54P61011 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.47□□□□□ -2.01
SRP54P61011 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SRP54P61011 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SRP54P61011 RNU5E-1-201ENST00000362477 120 ntBASIC2.47□□□□□ -2.01
SRP54P61011 Y_RNA.33-201ENST00000362591 102 ntBASIC2.47□□□□□ -2.01
SRP54P61011 SNORA4.3-201ENST00000365564 137 ntBASIC2.47□□□□□ -2.01
SRP54P61011 RNU6-395P-201ENST00000365662 106 ntBASIC2.47□□□□□ -2.01
SRP54P61011 RPL23AP32-201ENST00000395315 459 ntBASIC2.47□□□□□ -2.01
SRP54P61011 RNU6-1025P-201ENST00000410629 104 ntBASIC2.47□□□□□ -2.01
SRP54P61011 AC092809.3-201ENST00000415453 231 ntBASIC2.47□□□□□ -2.01
SRP54P61011 RPL23AP30-201ENST00000432419 501 ntBASIC2.47□□□□□ -2.01
SRP54P61011 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.47□□□□□ -2.01
SRP54P61011 RPS24P1-201ENST00000438550 371 ntBASIC2.47□□□□□ -2.01
SRP54P61011 TAF9P1-201ENST00000445421 515 ntBASIC2.47□□□□□ -2.01
SRP54P61011 TAF9P2-201ENST00000454958 515 ntBASIC2.47□□□□□ -2.01
SRP54P61011 AL441985.1-201ENST00000457727 251 ntBASIC2.47□□□□□ -2.01
SRP54P61011 AC080013.2-201ENST00000460866 323 ntBASIC2.47□□□□□ -2.01
SRP54P61011 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.47□□□□□ -2.01
SRP54P61011 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.47□□□□□ -2.01
SRP54P61011 AC008413.1-201ENST00000511864 177 ntBASIC2.47□□□□□ -2.01
SRP54P61011 RNU6-759P-201ENST00000516740 103 ntBASIC2.47□□□□□ -2.01
SRP54P61011 Y_RNA.717-201ENST00000517106 92 ntBASIC2.47□□□□□ -2.01
SRP54P61011 LRRC34P1-201ENST00000542742 915 ntBASIC2.47□□□□□ -2.01
SRP54P61011 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.47□□□□□ -2.01
SRP54P61011 AC091544.4-201ENST00000555268 342 ntBASIC2.47□□□□□ -2.01
SRP54P61011 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.47□□□□□ -2.01
SRP54P61011 LINC00933-203ENST00000559812 219 ntBASIC2.47□□□□□ -2.01
SRP54P61011 AC135628.1-201ENST00000568867 534 ntBASIC2.47□□□□□ -2.01
SRP54P61011 MIR4765-201ENST00000585007 77 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms