Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.52□□□□□ -2.17
ACTBP60709 DUXAP5-201ENST00000529668 529 ntBASIC1.52□□□□□ -2.17
ACTBP60709 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
ACTBP60709 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
ACTBP60709 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.52□□□□□ -2.17
ACTBP60709 AL121821.2-201ENST00000556081 394 ntBASIC1.52□□□□□ -2.17
ACTBP60709 AC233702.2-202ENST00000562547 291 ntBASIC1.52□□□□□ -2.17
ACTBP60709 AC073544.2-201ENST00000601155 540 ntBASIC1.52□□□□□ -2.17
ACTBP60709 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.52□□□□□ -2.17
ACTBP60709 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.52□□□□□ -2.17
ACTBP60709 AL109620.1-201ENST00000618738 1197 ntBASIC1.52□□□□□ -2.17
ACTBP60709 MIR7843-201ENST00000622274 79 ntBASIC1.52□□□□□ -2.17
ACTBP60709 AC126544.2-201ENST00000625174 749 ntBASIC1.52□□□□□ -2.17
ACTBP60709 AC097655.1-201ENST00000635075 318 ntBASIC1.52□□□□□ -2.17
ACTBP60709 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
ACTBP60709 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ACTBP60709 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ACTBP60709 AC002543.1-201ENST00000299783 1954 ntBASIC1.51□□□□□ -2.17
ACTBP60709 CDC27P3-201ENST00000635418 1910 ntBASIC1.51□□□□□ -2.17
ACTBP60709 RNU6-188P-201ENST00000364207 107 ntBASIC1.51□□□□□ -2.17
ACTBP60709 RNU6-777P-201ENST00000364265 104 ntBASIC1.51□□□□□ -2.17
ACTBP60709 SNORA25B-201ENST00000365507 128 ntBASIC1.51□□□□□ -2.17
ACTBP60709 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.51□□□□□ -2.17
ACTBP60709 RNU6-658P-201ENST00000384606 106 ntBASIC1.51□□□□□ -2.17
ACTBP60709 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
ACTBP60709 AL079342.1-201ENST00000401460 267 ntBASIC1.51□□□□□ -2.17
ACTBP60709 RNU2-72P-201ENST00000411175 163 ntBASIC1.51□□□□□ -2.17
ACTBP60709 RPL36AP53-201ENST00000432891 316 ntBASIC1.51□□□□□ -2.17
ACTBP60709 AC005094.1-201ENST00000440420 368 ntBASIC1.51□□□□□ -2.17
ACTBP60709 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.51□□□□□ -2.17
ACTBP60709 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.51□□□□□ -2.17
ACTBP60709 USP9YP10-201ENST00000454868 628 ntBASIC1.51□□□□□ -2.17
ACTBP60709 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
ACTBP60709 MEMO1P3-201ENST00000459811 302 ntBASIC1.51□□□□□ -2.17
ACTBP60709 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.51□□□□□ -2.17
ACTBP60709 BZW1P2-201ENST00000473537 826 ntBASIC1.51□□□□□ -2.17
ACTBP60709 AC068587.2-201ENST00000478386 781 ntBASIC1.51□□□□□ -2.17
ACTBP60709 RPL7P18-201ENST00000478965 734 ntBASIC1.51□□□□□ -2.17
ACTBP60709 RPL36AP48-201ENST00000485521 314 ntBASIC1.51□□□□□ -2.17
ACTBP60709 AC079203.1-201ENST00000487972 404 ntBASIC1.51□□□□□ -2.17
ACTBP60709 AC055855.1-201ENST00000489563 579 ntBASIC1.51□□□□□ -2.17
ACTBP60709 AC034222.1-201ENST00000494052 532 ntBASIC1.51□□□□□ -2.17
ACTBP60709 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.51□□□□□ -2.17
ACTBP60709 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.51□□□□□ -2.17
ACTBP60709 AC034114.1-201ENST00000520293 285 ntBASIC1.51□□□□□ -2.17
ACTBP60709 EEF1A1P37-201ENST00000522748 715 ntBASIC1.51□□□□□ -2.17
ACTBP60709 AP003168.1-201ENST00000530091 307 ntBASIC1.51□□□□□ -2.17
ACTBP60709 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.51□□□□□ -2.17
ACTBP60709 AC093012.1-202ENST00000549403 582 ntBASIC1.51□□□□□ -2.17
ACTBP60709 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.51□□□□□ -2.17
ACTBP60709 MTND3P13-201ENST00000574391 343 ntBASIC1.51□□□□□ -2.17
ACTBP60709 AC090079.2-201ENST00000575289 768 ntBASIC1.51□□□□□ -2.17
ACTBP60709 BNIP3P23-201ENST00000599655 511 ntBASIC1.51□□□□□ -2.17
ACTBP60709 AC068790.3-201ENST00000602988 553 ntBASIC1.51□□□□□ -2.17
ACTBP60709 DPPA3P3-201ENST00000603842 430 ntBASIC1.51□□□□□ -2.17
ACTBP60709 AC112220.2-201ENST00000605513 533 ntBASIC1.51□□□□□ -2.17
ACTBP60709 AC013470.4-201ENST00000619978 986 ntBASIC1.51□□□□□ -2.17
ACTBP60709 AP000676.3-201ENST00000623299 569 ntBASIC1.51□□□□□ -2.17
ACTBP60709 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.5□□□□□ -2.17
ACTBP60709 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
ACTBP60709 RNU6-560P-201ENST00000364007 108 ntBASIC1.5□□□□□ -2.17
ACTBP60709 RNU6-289P-201ENST00000364093 107 ntBASIC1.5□□□□□ -2.17
ACTBP60709 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
ACTBP60709 MIR1284-201ENST00000408337 120 ntBASIC1.5□□□□□ -2.17
ACTBP60709 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.5□□□□□ -2.17
ACTBP60709 USP9YP6-201ENST00000413550 854 ntBASIC1.5□□□□□ -2.17
ACTBP60709 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.5□□□□□ -2.17
ACTBP60709 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.5□□□□□ -2.17
ACTBP60709 EEF1E1P1-201ENST00000446998 430 ntBASIC1.5□□□□□ -2.17
ACTBP60709 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.5□□□□□ -2.17
ACTBP60709 AC007182.2-201ENST00000489251 402 ntBASIC1.5□□□□□ -2.17
ACTBP60709 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
ACTBP60709 RNU6-390P-201ENST00000516259 103 ntBASIC1.5□□□□□ -2.17
ACTBP60709 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.5□□□□□ -2.17
ACTBP60709 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.5□□□□□ -2.17
ACTBP60709 AP005435.4-201ENST00000529514 284 ntBASIC1.5□□□□□ -2.17
ACTBP60709 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.5□□□□□ -2.17
ACTBP60709 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.5□□□□□ -2.17
ACTBP60709 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.5□□□□□ -2.17
ACTBP60709 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.5□□□□□ -2.17
ACTBP60709 AC079598.5-201ENST00000547460 117 ntBASIC1.5□□□□□ -2.17
ACTBP60709 AC060771.1-201ENST00000582031 164 ntBASIC1.5□□□□□ -2.17
ACTBP60709 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.5□□□□□ -2.17
ACTBP60709 BNIP3P26-201ENST00000600827 554 ntBASIC1.5□□□□□ -2.17
ACTBP60709 AC091057.3-201ENST00000602684 733 ntBASIC1.5□□□□□ -2.17
ACTBP60709 SNRPGP17-201ENST00000603780 214 ntBASIC1.5□□□□□ -2.17
ACTBP60709 AC092953.2-201ENST00000608000 699 ntBASIC1.5□□□□□ -2.17
ACTBP60709 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.5□□□□□ -2.17
ACTBP60709 AC138627.2-201ENST00000624202 601 ntBASIC1.5□□□□□ -2.17
ACTBP60709 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ACTBP60709 MTND5P33-201ENST00000571250 1450 ntBASIC1.5□□□□□ -2.17
ACTBP60709 UBE2L2-201ENST00000254302 429 ntBASIC1.49□□□□□ -2.17
ACTBP60709 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
ACTBP60709 U8.3-201ENST00000363321 132 ntBASIC1.49□□□□□ -2.17
ACTBP60709 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.49□□□□□ -2.17
ACTBP60709 Z98749.2-208ENST00000381646 500 ntBASIC1.49□□□□□ -2.17
ACTBP60709 RNU6-1257P-201ENST00000384625 110 ntBASIC1.49□□□□□ -2.17
ACTBP60709 MIR19A-201ENST00000384878 82 ntBASIC1.49□□□□□ -2.17
ACTBP60709 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
ACTBP60709 AL353621.1-201ENST00000418219 243 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms