Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL391813.1-201ENST00000603098 260 ntBASIC2.25□□□□□ -2.05
LIM2P55344 AC007938.3-201ENST00000604965 623 ntBASIC2.25□□□□□ -2.05
LIM2P55344 AC104237.2-201ENST00000612456 443 ntBASIC2.25□□□□□ -2.05
LIM2P55344 AC008250.2-201ENST00000615261 205 ntBASIC2.25□□□□□ -2.05
LIM2P55344 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.25□□□□□ -2.05
LIM2P55344 MIR3974-201ENST00000637126 96 ntBASIC2.25□□□□□ -2.05
LIM2P55344 ZNF271P-202ENST00000465539 1970 ntBASIC2.25□□□□□ -2.05
LIM2P55344 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.25□□□□□ -2.05
LIM2P55344 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.25□□□□□ -2.05
LIM2P55344 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.25□□□□□ -2.05
LIM2P55344 AC010889.1-201ENST00000566193 2666 ntBASIC2.24□□□□□ -2.05
LIM2P55344 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
LIM2P55344 MTND4P35-201ENST00000604257 1375 ntBASIC2.24□□□□□ -2.05
LIM2P55344 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
LIM2P55344 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
LIM2P55344 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LIM2P55344 Z82195.2-201ENST00000612348 18351 ntBASIC2.24□□□□□ -2.05
LIM2P55344 RNU1-51P-201ENST00000365345 176 ntBASIC2.24□□□□□ -2.05
LIM2P55344 RNU6-395P-201ENST00000365662 106 ntBASIC2.24□□□□□ -2.05
LIM2P55344 SNORA20.2-201ENST00000383922 131 ntBASIC2.24□□□□□ -2.05
LIM2P55344 RNU6-1083P-201ENST00000384022 107 ntBASIC2.24□□□□□ -2.05
LIM2P55344 SNORA67.4-201ENST00000384688 142 ntBASIC2.24□□□□□ -2.05
LIM2P55344 SNORA40.3-201ENST00000390964 122 ntBASIC2.24□□□□□ -2.05
LIM2P55344 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.24□□□□□ -2.05
LIM2P55344 RNU2-39P-201ENST00000410604 198 ntBASIC2.24□□□□□ -2.05
LIM2P55344 RNU2-49P-201ENST00000410666 184 ntBASIC2.24□□□□□ -2.05
LIM2P55344 RNU6-248P-201ENST00000410720 107 ntBASIC2.24□□□□□ -2.05
LIM2P55344 RNU2-25P-201ENST00000411041 191 ntBASIC2.24□□□□□ -2.05
LIM2P55344 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.24□□□□□ -2.05
LIM2P55344 AC090960.1-201ENST00000421072 306 ntBASIC2.24□□□□□ -2.05
LIM2P55344 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.24□□□□□ -2.05
LIM2P55344 CR769767.1-201ENST00000436337 346 ntBASIC2.24□□□□□ -2.05
LIM2P55344 AC073614.1-201ENST00000438690 650 ntBASIC2.24□□□□□ -2.05
LIM2P55344 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.24□□□□□ -2.05
LIM2P55344 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LIM2P55344 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.24□□□□□ -2.05
LIM2P55344 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.24□□□□□ -2.05
LIM2P55344 AC093899.1-201ENST00000457984 376 ntBASIC2.24□□□□□ -2.05
LIM2P55344 UBE2DNL-203ENST00000474922 222 ntBASIC2.24□□□□□ -2.05
LIM2P55344 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.24□□□□□ -2.05
LIM2P55344 RN7SL636P-201ENST00000497504 294 ntBASIC2.24□□□□□ -2.05
LIM2P55344 AC105252.1-201ENST00000503089 286 ntBASIC2.24□□□□□ -2.05
LIM2P55344 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.24□□□□□ -2.05
LIM2P55344 AC117522.1-201ENST00000509821 380 ntBASIC2.24□□□□□ -2.05
LIM2P55344 MRPS36P2-201ENST00000512569 299 ntBASIC2.24□□□□□ -2.05
LIM2P55344 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.24□□□□□ -2.05
LIM2P55344 RNU5F-8P-201ENST00000515941 111 ntBASIC2.24□□□□□ -2.05
LIM2P55344 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.24□□□□□ -2.05
LIM2P55344 RN7SKP40-201ENST00000517211 242 ntBASIC2.24□□□□□ -2.05
LIM2P55344 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.24□□□□□ -2.05
LIM2P55344 Z99497.2-201ENST00000603634 310 ntBASIC2.24□□□□□ -2.05
LIM2P55344 AL022154.1-201ENST00000604698 785 ntBASIC2.24□□□□□ -2.05
LIM2P55344 AL139286.2-201ENST00000606838 396 ntBASIC2.24□□□□□ -2.05
LIM2P55344 AC046143.2-201ENST00000609789 160 ntBASIC2.24□□□□□ -2.05
LIM2P55344 AL589743.7-201ENST00000612637 233 ntBASIC2.24□□□□□ -2.05
LIM2P55344 AC025034.2-201ENST00000623264 286 ntBASIC2.24□□□□□ -2.05
LIM2P55344 AL512643.1-201ENST00000635735 524 ntBASIC2.24□□□□□ -2.05
LIM2P55344 Z99571.1-201ENST00000636677 394 ntBASIC2.24□□□□□ -2.05
LIM2P55344 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.24□□□□□ -2.05
LIM2P55344 AC103710.2-202ENST00000641454 2853 ntBASIC2.24□□□□□ -2.05
LIM2P55344 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LIM2P55344 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.23□□□□□ -2.05
LIM2P55344 CDC27P3-201ENST00000635418 1910 ntBASIC2.23□□□□□ -2.05
LIM2P55344 RNU6-288P-201ENST00000363690 104 ntBASIC2.23□□□□□ -2.05
LIM2P55344 SNORD114-30-201ENST00000364448 72 ntBASIC2.23□□□□□ -2.05
LIM2P55344 RNU6-1180P-201ENST00000364935 107 ntBASIC2.23□□□□□ -2.05
LIM2P55344 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LIM2P55344 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.23□□□□□ -2.05
LIM2P55344 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LIM2P55344 AL139095.1-201ENST00000404326 391 ntBASIC2.23□□□□□ -2.05
LIM2P55344 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.23□□□□□ -2.05
LIM2P55344 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.23□□□□□ -2.05
LIM2P55344 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.23□□□□□ -2.05
LIM2P55344 RPL23AP30-201ENST00000432419 501 ntBASIC2.23□□□□□ -2.05
LIM2P55344 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.23□□□□□ -2.05
LIM2P55344 MICF-203ENST00000432679 129 ntBASIC2.23□□□□□ -2.05
LIM2P55344 AC236972.1-201ENST00000433225 199 ntBASIC2.23□□□□□ -2.05
LIM2P55344 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.23□□□□□ -2.05
LIM2P55344 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.23□□□□□ -2.05
LIM2P55344 AC009296.1-201ENST00000443146 155 ntBASIC2.23□□□□□ -2.05
LIM2P55344 AC079781.2-201ENST00000446424 169 ntBASIC2.23□□□□□ -2.05
LIM2P55344 DPPA3P1-201ENST00000448050 469 ntBASIC2.23□□□□□ -2.05
LIM2P55344 RPS27AP8-201ENST00000452665 445 ntBASIC2.23□□□□□ -2.05
LIM2P55344 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.23□□□□□ -2.05
LIM2P55344 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.23□□□□□ -2.05
LIM2P55344 AC010486.3-201ENST00000511602 785 ntBASIC2.23□□□□□ -2.05
LIM2P55344 RNA5SP24-201ENST00000516478 95 ntBASIC2.23□□□□□ -2.05
LIM2P55344 RNU6-1183P-201ENST00000517054 60 ntBASIC2.23□□□□□ -2.05
LIM2P55344 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
LIM2P55344 AC060788.1-201ENST00000521318 469 ntBASIC2.23□□□□□ -2.05
LIM2P55344 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.23□□□□□ -2.05
LIM2P55344 AC006199.1-201ENST00000548728 219 ntBASIC2.23□□□□□ -2.05
LIM2P55344 AC087883.1-201ENST00000551882 391 ntBASIC2.23□□□□□ -2.05
LIM2P55344 AC078814.3-201ENST00000553036 491 ntBASIC2.23□□□□□ -2.05
LIM2P55344 AL157871.3-201ENST00000557231 293 ntBASIC2.23□□□□□ -2.05
LIM2P55344 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.23□□□□□ -2.05
LIM2P55344 AC012414.6-201ENST00000568241 401 ntBASIC2.23□□□□□ -2.05
LIM2P55344 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.23□□□□□ -2.05
LIM2P55344 MIR6134-201ENST00000617606 109 ntBASIC2.23□□□□□ -2.05
LIM2P55344 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms