Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.72□□□□□ -1.65
EPHA4P54764 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.72□□□□□ -1.65
EPHA4P54764 AC020895.1-201ENST00000595362 272 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 AL078605.1-201ENST00000603529 500 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
EPHA4P54764 AC015914.2-201ENST00000618167 288 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 AC112200.1-201ENST00000625015 234 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.72□□□□□ -1.65
EPHA4P54764 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
EPHA4P54764 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
EPHA4P54764 AL359854.1-201ENST00000614203 1594 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.72□□□□□ -1.65
EPHA4P54764 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
EPHA4P54764 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
EPHA4P54764 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
EPHA4P54764 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.72□□□□□ -1.65
EPHA4P54764 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
EPHA4P54764 AC022336.2-201ENST00000568966 2538 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.72□□□□□ -1.65
EPHA4P54764 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.72□□□□□ -1.65
EPHA4P54764 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.71□□□□□ -1.65
EPHA4P54764 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
EPHA4P54764 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.71□□□□□ -1.65
EPHA4P54764 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
EPHA4P54764 AC018529.3-201ENST00000624212 2254 ntBASIC4.71□□□□□ -1.65
EPHA4P54764 SRP72P2-201ENST00000344851 1979 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
EPHA4P54764 RNA5SP191-201ENST00000362585 102 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 SNORD56.1-201ENST00000362913 68 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 RNU1-140P-201ENST00000365040 165 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 Y_RNA.331-201ENST00000365267 102 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 Y_RNA.418-201ENST00000384029 102 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 RNU6-281P-201ENST00000384212 103 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 RNU6-1289P-201ENST00000384431 106 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 RNU6-159P-201ENST00000391080 106 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 RPS16P5-201ENST00000406501 404 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 Y_RNA.625-201ENST00000411256 107 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 RNU6-1001P-201ENST00000411265 100 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 AL451074.5-201ENST00000415894 435 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.71□□□□□ -1.66
EPHA4P54764 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.71□□□□□ -1.66
EPHA4P54764 RPL21P66-201ENST00000426566 466 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 RPL23AP95-201ENST00000426806 265 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 COX6B1P7-201ENST00000430845 235 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 SETP5-201ENST00000437270 562 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 RPL7AP61-201ENST00000443410 636 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 AC000111.2-201ENST00000448200 210 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 SNRPGP7-201ENST00000469016 106 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 RPL30P5-201ENST00000494923 336 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 AC091874.1-201ENST00000511402 339 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 RNU7-200P-201ENST00000516105 62 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 RNA5SP464-201ENST00000516251 108 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 RNA5SP392-201ENST00000516905 112 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 AP001880.2-201ENST00000538233 448 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 RN7SL52P-201ENST00000584271 284 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 AC005176.2-201ENST00000596933 147 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 AC068831.7-201ENST00000616954 363 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 RN7SL722P-201ENST00000617780 284 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 RN7SL565P-201ENST00000618246 284 ntBASIC4.71□□□□□ -1.66
EPHA4P54764 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.71□□□□□ -1.66
EPHA4P54764 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.71□□□□□ -1.66
EPHA4P54764 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
EPHA4P54764 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
EPHA4P54764 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
EPHA4P54764 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.71□□□□□ -1.66
EPHA4P54764 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
EPHA4P54764 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
EPHA4P54764 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
EPHA4P54764 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.7□□□□□ -1.66
EPHA4P54764 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
EPHA4P54764 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
EPHA4P54764 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
EPHA4P54764 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.7□□□□□ -1.66
EPHA4P54764 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.7□□□□□ -1.66
EPHA4P54764 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.7□□□□□ -1.66
EPHA4P54764 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
EPHA4P54764 FTLP6-201ENST00000355274 422 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 RNU5B-2P-201ENST00000363036 113 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 Y_RNA.136-201ENST00000363444 102 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 SNORD32A-201ENST00000364805 84 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 MIR518D-201ENST00000385014 87 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 AL357515.1-201ENST00000402967 542 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 AC011753.3-201ENST00000443436 406 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 AC012308.1-201ENST00000451232 178 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 RN7SL738P-201ENST00000470264 297 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 AC022795.1-201ENST00000473808 480 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 SCARNA22-201ENST00000503991 125 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 AC097462.2-201ENST00000504623 481 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 AC108043.1-201ENST00000512696 574 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 RNU6-1282P-201ENST00000516735 96 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.7□□□□□ -1.66
EPHA4P54764 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.7□□□□□ -1.66
EPHA4P54764 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.7□□□□□ -1.66
EPHA4P54764 AP006289.1-201ENST00000538089 277 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.7□□□□□ -1.66
EPHA4P54764 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.7□□□□□ -1.66
EPHA4P54764 FTX_3.1-201ENST00000610451 147 ntBASIC4.7□□□□□ -1.66
EPHA4P54764 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms