Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.32□□□□□ -1.88
PMS2P54278 AC078899.3-201ENST00000599065 212 ntBASIC3.32□□□□□ -1.88
PMS2P54278 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.32□□□□□ -1.88
PMS2P54278 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.32□□□□□ -1.88
PMS2P54278 AC010338.1-201ENST00000621823 717 ntBASIC3.32□□□□□ -1.88
PMS2P54278 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PMS2P54278 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.32□□□□□ -1.88
PMS2P54278 OR4G1P-203ENST00000641984 1631 ntBASIC3.32□□□□□ -1.88
PMS2P54278 AC007785.2-201ENST00000598627 1916 ntBASIC3.32□□□□□ -1.88
PMS2P54278 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PMS2P54278 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
PMS2P54278 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PMS2P54278 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PMS2P54278 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.31□□□□□ -1.88
PMS2P54278 AC103988.1-201ENST00000566382 2177 ntBASIC3.31□□□□□ -1.88
PMS2P54278 MTND5P19-201ENST00000424872 1794 ntBASIC3.31□□□□□ -1.88
PMS2P54278 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PMS2P54278 RNU6-845P-201ENST00000362578 103 ntBASIC3.31□□□□□ -1.88
PMS2P54278 RNU4-35P-201ENST00000362588 141 ntBASIC3.31□□□□□ -1.88
PMS2P54278 RNU6-552P-201ENST00000362869 119 ntBASIC3.31□□□□□ -1.88
PMS2P54278 Y_RNA.166-201ENST00000363730 102 ntBASIC3.31□□□□□ -1.88
PMS2P54278 Y_RNA.263-201ENST00000364659 114 ntBASIC3.31□□□□□ -1.88
PMS2P54278 SMIM11P1-201ENST00000369586 178 ntBASIC3.31□□□□□ -1.88
PMS2P54278 RNU6-1029P-201ENST00000384109 107 ntBASIC3.31□□□□□ -1.88
PMS2P54278 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.31□□□□□ -1.88
PMS2P54278 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PMS2P54278 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.31□□□□□ -1.88
PMS2P54278 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.31□□□□□ -1.88
PMS2P54278 AC005300.1-201ENST00000428401 373 ntBASIC3.31□□□□□ -1.88
PMS2P54278 RPL21P40-201ENST00000428586 483 ntBASIC3.31□□□□□ -1.88
PMS2P54278 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.31□□□□□ -1.88
PMS2P54278 AC025518.1-201ENST00000479856 347 ntBASIC3.31□□□□□ -1.88
PMS2P54278 TTC39CP1-201ENST00000512513 755 ntBASIC3.31□□□□□ -1.88
PMS2P54278 RNU6-1282P-201ENST00000516735 96 ntBASIC3.31□□□□□ -1.88
PMS2P54278 OR5AL2P-201ENST00000532185 920 ntBASIC3.31□□□□□ -1.88
PMS2P54278 BNIP3P6-201ENST00000549284 499 ntBASIC3.31□□□□□ -1.88
PMS2P54278 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.31□□□□□ -1.88
PMS2P54278 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.31□□□□□ -1.88
PMS2P54278 AC106782.4-201ENST00000568264 210 ntBASIC3.31□□□□□ -1.88
PMS2P54278 AC011712.1-201ENST00000588959 234 ntBASIC3.31□□□□□ -1.88
PMS2P54278 YPEL5P2-201ENST00000605553 359 ntBASIC3.31□□□□□ -1.88
PMS2P54278 AL138880.2-201ENST00000616214 239 ntBASIC3.31□□□□□ -1.88
PMS2P54278 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.31□□□□□ -1.88
PMS2P54278 AC007998.5-201ENST00000622938 237 ntBASIC3.31□□□□□ -1.88
PMS2P54278 AC025034.2-201ENST00000623264 286 ntBASIC3.31□□□□□ -1.88
PMS2P54278 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PMS2P54278 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PMS2P54278 ASNSP3-201ENST00000451989 1306 ntBASIC3.3□□□□□ -1.88
PMS2P54278 NACAP2-201ENST00000318548 624 ntBASIC3.3□□□□□ -1.88
PMS2P54278 SNORA48.2-201ENST00000390926 124 ntBASIC3.3□□□□□ -1.88
PMS2P54278 RNU6-332P-201ENST00000391193 108 ntBASIC3.3□□□□□ -1.88
PMS2P54278 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.3□□□□□ -1.88
PMS2P54278 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.3□□□□□ -1.88
PMS2P54278 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.3□□□□□ -1.88
PMS2P54278 MTCO3P46-201ENST00000425787 232 ntBASIC3.3□□□□□ -1.88
PMS2P54278 MTND3P23-201ENST00000431980 347 ntBASIC3.3□□□□□ -1.88
PMS2P54278 AC244505.4-201ENST00000434905 287 ntBASIC3.3□□□□□ -1.88
PMS2P54278 SSXP5-201ENST00000443473 287 ntBASIC3.3□□□□□ -1.88
PMS2P54278 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PMS2P54278 ELOCP23-201ENST00000452014 332 ntBASIC3.3□□□□□ -1.88
PMS2P54278 MTND3P16-201ENST00000452205 344 ntBASIC3.3□□□□□ -1.88
PMS2P54278 RPS29P15-201ENST00000458329 171 ntBASIC3.3□□□□□ -1.88
PMS2P54278 RNU7-180P-201ENST00000459240 63 ntBASIC3.3□□□□□ -1.88
PMS2P54278 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.3□□□□□ -1.88
PMS2P54278 AC006445.2-201ENST00000510061 472 ntBASIC3.3□□□□□ -1.88
PMS2P54278 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.3□□□□□ -1.88
PMS2P54278 RNU4-29P-201ENST00000515943 174 ntBASIC3.3□□□□□ -1.88
PMS2P54278 SNORA31.1-201ENST00000515993 133 ntBASIC3.3□□□□□ -1.88
PMS2P54278 SNORA31.3-201ENST00000516029 96 ntBASIC3.3□□□□□ -1.88
PMS2P54278 SNORA31.5-201ENST00000516190 133 ntBASIC3.3□□□□□ -1.88
PMS2P54278 RNU6-927P-201ENST00000516199 100 ntBASIC3.3□□□□□ -1.88
PMS2P54278 RNA5SP503-201ENST00000517047 117 ntBASIC3.3□□□□□ -1.88
PMS2P54278 RN7SKP258-201ENST00000517151 304 ntBASIC3.3□□□□□ -1.88
PMS2P54278 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.3□□□□□ -1.88
PMS2P54278 AP006587.4-201ENST00000526053 529 ntBASIC3.3□□□□□ -1.88
PMS2P54278 AC007536.1-201ENST00000533382 349 ntBASIC3.3□□□□□ -1.88
PMS2P54278 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.3□□□□□ -1.88
PMS2P54278 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
PMS2P54278 HMGB1P14-201ENST00000557424 591 ntBASIC3.3□□□□□ -1.88
PMS2P54278 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.3□□□□□ -1.88
PMS2P54278 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.3□□□□□ -1.88
PMS2P54278 RNU6-89P-201ENST00000606519 100 ntBASIC3.3□□□□□ -1.88
PMS2P54278 MIR8057-201ENST00000620957 69 ntBASIC3.3□□□□□ -1.88
PMS2P54278 AL049641.1-201ENST00000441055 1948 ntBASIC3.3□□□□□ -1.88
PMS2P54278 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PMS2P54278 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
PMS2P54278 AC073544.1-201ENST00000600110 1595 ntBASIC3.29□□□□□ -1.88
PMS2P54278 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PMS2P54278 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PMS2P54278 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PMS2P54278 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PMS2P54278 Y_RNA.61-201ENST00000362835 102 ntBASIC3.29□□□□□ -1.88
PMS2P54278 Y_RNA.231-201ENST00000364358 102 ntBASIC3.29□□□□□ -1.88
PMS2P54278 RNU6-946P-201ENST00000383878 107 ntBASIC3.29□□□□□ -1.88
PMS2P54278 RNU6-38P-201ENST00000384085 107 ntBASIC3.29□□□□□ -1.88
PMS2P54278 RNU6-767P-201ENST00000384132 107 ntBASIC3.29□□□□□ -1.88
PMS2P54278 RNU1-101P-201ENST00000391171 127 ntBASIC3.29□□□□□ -1.88
PMS2P54278 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PMS2P54278 RNA5SP38-201ENST00000410750 119 ntBASIC3.29□□□□□ -1.88
PMS2P54278 Z85995.1-201ENST00000415547 335 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 254 ms