Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.34□□□□□ -2.03
EFNA3P52797 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.34□□□□□ -2.03
EFNA3P52797 AC139453.3-201ENST00000493276 369 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.34□□□□□ -2.03
EFNA3P52797 AC079140.3-201ENST00000511111 550 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.34□□□□□ -2.03
EFNA3P52797 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
EFNA3P52797 AC022447.1-201ENST00000515358 464 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 RN7SKP298-201ENST00000515950 94 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 RNU2-10P-201ENST00000516375 211 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 RNA5SP337-201ENST00000517007 109 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 RNU2-46P-201ENST00000517038 113 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.34□□□□□ -2.03
EFNA3P52797 AP003122.3-201ENST00000526316 255 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.34□□□□□ -2.03
EFNA3P52797 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.34□□□□□ -2.03
EFNA3P52797 MIR3670-2-201ENST00000582974 65 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 MIR3670-1-201ENST00000584160 65 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 MIR3670-3-201ENST00000584855 65 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.34□□□□□ -2.03
EFNA3P52797 AL161734.1-201ENST00000609720 557 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 MIR3670-4-201ENST00000612260 65 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 HULC.1-201ENST00000612720 240 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 AL133173.2-201ENST00000614270 90 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.34□□□□□ -2.03
EFNA3P52797 AC072046.2-201ENST00000618366 268 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.34□□□□□ -2.03
EFNA3P52797 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
EFNA3P52797 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
EFNA3P52797 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
EFNA3P52797 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.33□□□□□ -2.04
EFNA3P52797 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.33□□□□□ -2.04
EFNA3P52797 U8.3-201ENST00000363321 132 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 Y_RNA.194-201ENST00000363985 102 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 Y_RNA.359-201ENST00000365498 102 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 SMIM11P1-201ENST00000369586 178 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 SNORA75-201ENST00000384158 137 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 RNU6-297P-201ENST00000384636 107 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 Y_RNA.559-201ENST00000384686 107 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
EFNA3P52797 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
EFNA3P52797 MIR888-201ENST00000401186 77 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 RNU6-193P-201ENST00000410977 107 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 AC023141.4-201ENST00000412031 328 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.33□□□□□ -2.04
EFNA3P52797 AL513477.1-202ENST00000417061 214 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 OOSP1P1-201ENST00000423265 274 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 SKA2P1-201ENST00000425592 390 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.33□□□□□ -2.04
EFNA3P52797 ISCA1P6-201ENST00000427740 390 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.33□□□□□ -2.04
EFNA3P52797 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.33□□□□□ -2.04
EFNA3P52797 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.33□□□□□ -2.04
EFNA3P52797 AL136380.1-201ENST00000447970 162 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.33□□□□□ -2.04
EFNA3P52797 RPS15AP27-201ENST00000449183 343 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 GAPDHP17-201ENST00000449858 1001 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.33□□□□□ -2.04
EFNA3P52797 KLF3P2-201ENST00000465138 268 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 RPS27AP10-201ENST00000496103 208 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 SNORA31.3-201ENST00000516029 96 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 Vault.3-201ENST00000516676 95 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.33□□□□□ -2.04
EFNA3P52797 AP002963.1-201ENST00000530590 184 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.33□□□□□ -2.04
EFNA3P52797 AC091544.4-201ENST00000555268 342 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.33□□□□□ -2.04
EFNA3P52797 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.33□□□□□ -2.04
EFNA3P52797 AC007621.1-201ENST00000604544 437 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 AC091304.9-201ENST00000612091 226 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.33□□□□□ -2.04
EFNA3P52797 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.33□□□□□ -2.04
EFNA3P52797 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.33□□□□□ -2.04
EFNA3P52797 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
EFNA3P52797 MTND5P29-201ENST00000458676 1807 ntBASIC2.33□□□□□ -2.04
EFNA3P52797 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
EFNA3P52797 RNU5E-1-201ENST00000362477 120 ntBASIC2.32□□□□□ -2.04
EFNA3P52797 Y_RNA.318-201ENST00000365131 97 ntBASIC2.32□□□□□ -2.04
EFNA3P52797 RNU1-100P-201ENST00000365255 165 ntBASIC2.32□□□□□ -2.04
EFNA3P52797 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
EFNA3P52797 SNORA20.2-201ENST00000383922 131 ntBASIC2.32□□□□□ -2.04
EFNA3P52797 RNU6-248P-201ENST00000410720 107 ntBASIC2.32□□□□□ -2.04
EFNA3P52797 RN7SKP284-201ENST00000411002 343 ntBASIC2.32□□□□□ -2.04
EFNA3P52797 AC092809.3-201ENST00000415453 231 ntBASIC2.32□□□□□ -2.04
EFNA3P52797 ZNF90P2-204ENST00000419323 1075 ntBASIC2.32□□□□□ -2.04
EFNA3P52797 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.32□□□□□ -2.04
EFNA3P52797 FABP5P15-201ENST00000453566 214 ntBASIC2.32□□□□□ -2.04
EFNA3P52797 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.32□□□□□ -2.04
EFNA3P52797 SNORD97-201ENST00000459187 142 ntBASIC2.32□□□□□ -2.04
EFNA3P52797 RPL31P41-201ENST00000477967 372 ntBASIC2.32□□□□□ -2.04
EFNA3P52797 RAP1BP2-201ENST00000478270 544 ntBASIC2.32□□□□□ -2.04
EFNA3P52797 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.32□□□□□ -2.04
EFNA3P52797 RPL37P25-201ENST00000507308 276 ntBASIC2.32□□□□□ -2.04
EFNA3P52797 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.32□□□□□ -2.04
EFNA3P52797 HMGB1P41-201ENST00000520234 440 ntBASIC2.32□□□□□ -2.04
EFNA3P52797 AC022634.1-201ENST00000520765 532 ntBASIC2.32□□□□□ -2.04
EFNA3P52797 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.32□□□□□ -2.04
EFNA3P52797 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.32□□□□□ -2.04
EFNA3P52797 AL359212.1-201ENST00000556608 614 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms