Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL021368.2-201ENST00000606125 5352 ntBASIC3.15□□□□□ -1.9
SOX2P48431 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
SOX2P48431 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
SOX2P48431 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SOX2P48431 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SOX2P48431 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.15□□□□□ -1.9
SOX2P48431 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SOX2P48431 FTLP6-201ENST00000355274 422 ntBASIC3.15□□□□□ -1.91
SOX2P48431 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.15□□□□□ -1.91
SOX2P48431 RNA5SP295-201ENST00000362655 121 ntBASIC3.15□□□□□ -1.91
SOX2P48431 RNU6-593P-201ENST00000364716 112 ntBASIC3.15□□□□□ -1.91
SOX2P48431 RNU6-213P-201ENST00000384051 104 ntBASIC3.15□□□□□ -1.91
SOX2P48431 RNU6-217P-201ENST00000384164 104 ntBASIC3.15□□□□□ -1.91
SOX2P48431 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SOX2P48431 SNORA40C-201ENST00000391285 128 ntBASIC3.15□□□□□ -1.91
SOX2P48431 EI24P2-201ENST00000397776 1076 ntBASIC3.15□□□□□ -1.91
SOX2P48431 AL592148.1-201ENST00000413568 445 ntBASIC3.15□□□□□ -1.91
SOX2P48431 AC016831.2-201ENST00000417179 352 ntBASIC3.15□□□□□ -1.91
SOX2P48431 RPL17P36-201ENST00000420302 549 ntBASIC3.15□□□□□ -1.91
SOX2P48431 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.15□□□□□ -1.91
SOX2P48431 AL590632.1-201ENST00000424289 371 ntBASIC3.15□□□□□ -1.91
SOX2P48431 UBE2V1P4-201ENST00000425374 344 ntBASIC3.15□□□□□ -1.91
SOX2P48431 SKA2P1-201ENST00000425592 390 ntBASIC3.15□□□□□ -1.91
SOX2P48431 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.15□□□□□ -1.91
SOX2P48431 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SOX2P48431 AL627311.1-201ENST00000431514 115 ntBASIC3.15□□□□□ -1.91
SOX2P48431 BRK1P2-201ENST00000442875 223 ntBASIC3.15□□□□□ -1.91
SOX2P48431 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.15□□□□□ -1.91
SOX2P48431 H2AFZP6-201ENST00000444403 394 ntBASIC3.15□□□□□ -1.91
SOX2P48431 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.15□□□□□ -1.91
SOX2P48431 RNU6-572P-201ENST00000516724 80 ntBASIC3.15□□□□□ -1.91
SOX2P48431 Y_RNA.718-201ENST00000517110 102 ntBASIC3.15□□□□□ -1.91
SOX2P48431 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.15□□□□□ -1.91
SOX2P48431 AP005597.4-201ENST00000526762 229 ntBASIC3.15□□□□□ -1.91
SOX2P48431 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.15□□□□□ -1.91
SOX2P48431 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
SOX2P48431 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.15□□□□□ -1.91
SOX2P48431 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.15□□□□□ -1.91
SOX2P48431 AL645944.1-201ENST00000603857 493 ntBASIC3.15□□□□□ -1.91
SOX2P48431 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.15□□□□□ -1.91
SOX2P48431 MIR6128-201ENST00000615528 109 ntBASIC3.15□□□□□ -1.91
SOX2P48431 AC084781.2-201ENST00000615568 161 ntBASIC3.15□□□□□ -1.91
SOX2P48431 MIR6758-201ENST00000620653 63 ntBASIC3.15□□□□□ -1.91
SOX2P48431 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SOX2P48431 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SOX2P48431 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SOX2P48431 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
SOX2P48431 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.15□□□□□ -1.91
SOX2P48431 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SOX2P48431 CUL1P1-201ENST00000509510 2425 ntBASIC3.14□□□□□ -1.91
SOX2P48431 AC068647.1-201ENST00000489539 2265 ntBASIC3.14□□□□□ -1.91
SOX2P48431 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.14□□□□□ -1.91
SOX2P48431 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.14□□□□□ -1.91
SOX2P48431 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
SOX2P48431 SNORD14B-201ENST00000364533 90 ntBASIC3.14□□□□□ -1.91
SOX2P48431 RNU6-384P-201ENST00000364900 104 ntBASIC3.14□□□□□ -1.91
SOX2P48431 SNORA62-201ENST00000365493 153 ntBASIC3.14□□□□□ -1.91
SOX2P48431 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.14□□□□□ -1.91
SOX2P48431 RNU6-95P-201ENST00000384697 107 ntBASIC3.14□□□□□ -1.91
SOX2P48431 RNY4P36-201ENST00000391116 96 ntBASIC3.14□□□□□ -1.91
SOX2P48431 MTCYBP4-201ENST00000401524 249 ntBASIC3.14□□□□□ -1.91
SOX2P48431 RNA5SP317-201ENST00000410176 116 ntBASIC3.14□□□□□ -1.91
SOX2P48431 RNA5SP311-201ENST00000411290 116 ntBASIC3.14□□□□□ -1.91
SOX2P48431 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.14□□□□□ -1.91
SOX2P48431 AL354751.2-201ENST00000415471 210 ntBASIC3.14□□□□□ -1.91
SOX2P48431 AC098614.2-201ENST00000426040 255 ntBASIC3.14□□□□□ -1.91
SOX2P48431 MTCO2P12-201ENST00000427426 682 ntBASIC3.14□□□□□ -1.91
SOX2P48431 AC092017.2-201ENST00000427600 362 ntBASIC3.14□□□□□ -1.91
SOX2P48431 AL078601.1-201ENST00000444542 271 ntBASIC3.14□□□□□ -1.91
SOX2P48431 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.14□□□□□ -1.91
SOX2P48431 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.14□□□□□ -1.91
SOX2P48431 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.14□□□□□ -1.91
SOX2P48431 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.14□□□□□ -1.91
SOX2P48431 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.14□□□□□ -1.91
SOX2P48431 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SOX2P48431 AC092436.3-201ENST00000511788 257 ntBASIC3.14□□□□□ -1.91
SOX2P48431 RNU6-1170P-201ENST00000515974 106 ntBASIC3.14□□□□□ -1.91
SOX2P48431 RNU2-27P-201ENST00000516185 142 ntBASIC3.14□□□□□ -1.91
SOX2P48431 RNA5SP315-201ENST00000516340 116 ntBASIC3.14□□□□□ -1.91
SOX2P48431 RNA5SP312-201ENST00000517068 116 ntBASIC3.14□□□□□ -1.91
SOX2P48431 RNU1-54P-201ENST00000517181 120 ntBASIC3.14□□□□□ -1.91
SOX2P48431 APOOP3-201ENST00000536787 586 ntBASIC3.14□□□□□ -1.91
SOX2P48431 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.14□□□□□ -1.91
SOX2P48431 AL121821.2-201ENST00000556081 394 ntBASIC3.14□□□□□ -1.91
SOX2P48431 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.14□□□□□ -1.91
SOX2P48431 MIR5690-201ENST00000583739 73 ntBASIC3.14□□□□□ -1.91
SOX2P48431 FTX_3.1-201ENST00000610451 147 ntBASIC3.14□□□□□ -1.91
SOX2P48431 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.14□□□□□ -1.91
SOX2P48431 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.14□□□□□ -1.91
SOX2P48431 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SOX2P48431 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SOX2P48431 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SOX2P48431 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.13□□□□□ -1.91
SOX2P48431 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.13□□□□□ -1.91
SOX2P48431 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.13□□□□□ -1.91
SOX2P48431 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.13□□□□□ -1.91
SOX2P48431 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SOX2P48431 SPRR2C-201ENST00000290702 219 ntBASIC3.13□□□□□ -1.91
SOX2P48431 MIR30E-201ENST00000362104 92 ntBASIC3.13□□□□□ -1.91
SOX2P48431 MIR372-201ENST00000362225 67 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms