Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 RPL32P28-201ENST00000443577 397 ntBASIC1.2□□□□□ -2.22
RPL28P46779 MTCO1P27-201ENST00000448269 226 ntBASIC1.2□□□□□ -2.22
RPL28P46779 KATNBL1P6-201ENST00000453433 915 ntBASIC1.2□□□□□ -2.22
RPL28P46779 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.2□□□□□ -2.22
RPL28P46779 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.2□□□□□ -2.22
RPL28P46779 RPL21P99-201ENST00000480369 423 ntBASIC1.2□□□□□ -2.22
RPL28P46779 MTAPP1-201ENST00000489154 819 ntBASIC1.2□□□□□ -2.22
RPL28P46779 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.2□□□□□ -2.22
RPL28P46779 RNU5B-3P-201ENST00000516601 115 ntBASIC1.2□□□□□ -2.22
RPL28P46779 RNU6-64P-201ENST00000517119 105 ntBASIC1.2□□□□□ -2.22
RPL28P46779 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.2□□□□□ -2.22
RPL28P46779 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.2□□□□□ -2.22
RPL28P46779 RANP3-201ENST00000530970 276 ntBASIC1.2□□□□□ -2.22
RPL28P46779 OR5B19P-201ENST00000531766 928 ntBASIC1.2□□□□□ -2.22
RPL28P46779 AC022254.1-201ENST00000567857 235 ntBASIC1.2□□□□□ -2.22
RPL28P46779 AC026271.5-201ENST00000577873 130 ntBASIC1.2□□□□□ -2.22
RPL28P46779 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.2□□□□□ -2.22
RPL28P46779 AC112220.2-201ENST00000605513 533 ntBASIC1.2□□□□□ -2.22
RPL28P46779 NDUFA8P1-201ENST00000605525 367 ntBASIC1.2□□□□□ -2.22
RPL28P46779 AC006270.3-201ENST00000605967 1036 ntBASIC1.2□□□□□ -2.22
RPL28P46779 AC103710.1-201ENST00000610003 901 ntBASIC1.2□□□□□ -2.22
RPL28P46779 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
RPL28P46779 AC008121.3-201ENST00000618726 433 ntBASIC1.2□□□□□ -2.22
RPL28P46779 AC012150.2-201ENST00000621300 544 ntBASIC1.2□□□□□ -2.22
RPL28P46779 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.2□□□□□ -2.22
RPL28P46779 AC112204.3-201ENST00000623822 332 ntBASIC1.2□□□□□ -2.22
RPL28P46779 AC126544.2-201ENST00000625174 749 ntBASIC1.2□□□□□ -2.22
RPL28P46779 AC099654.9-201ENST00000637055 678 ntBASIC1.2□□□□□ -2.22
RPL28P46779 U6.99-201ENST00000637524 83 ntBASIC1.2□□□□□ -2.22
RPL28P46779 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.2□□□□□ -2.22
RPL28P46779 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.2□□□□□ -2.22
RPL28P46779 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
RPL28P46779 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
RPL28P46779 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RPL28P46779 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RPL28P46779 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RPL28P46779 TEX21P-201ENST00000447107 1476 ntBASIC1.19□□□□□ -2.22
RPL28P46779 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
RPL28P46779 RNU6-1284P-201ENST00000363701 100 ntBASIC1.19□□□□□ -2.22
RPL28P46779 RNU6-560P-201ENST00000364007 108 ntBASIC1.19□□□□□ -2.22
RPL28P46779 RNU6-14P-201ENST00000384630 106 ntBASIC1.19□□□□□ -2.22
RPL28P46779 MIR518D-201ENST00000385014 87 ntBASIC1.19□□□□□ -2.22
RPL28P46779 RNA5SP212-201ENST00000391223 107 ntBASIC1.19□□□□□ -2.22
RPL28P46779 RNU6-1140P-201ENST00000410517 106 ntBASIC1.19□□□□□ -2.22
RPL28P46779 MTCO1P17-201ENST00000411522 491 ntBASIC1.19□□□□□ -2.22
RPL28P46779 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
RPL28P46779 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.19□□□□□ -2.22
RPL28P46779 AL449283.1-202ENST00000418249 604 ntBASIC1.19□□□□□ -2.22
RPL28P46779 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.19□□□□□ -2.22
RPL28P46779 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.19□□□□□ -2.22
RPL28P46779 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.19□□□□□ -2.22
RPL28P46779 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.19□□□□□ -2.22
RPL28P46779 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.19□□□□□ -2.22
RPL28P46779 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.19□□□□□ -2.22
RPL28P46779 HMGB1P27-201ENST00000431429 603 ntBASIC1.19□□□□□ -2.22
RPL28P46779 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.19□□□□□ -2.22
RPL28P46779 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
RPL28P46779 AL137159.1-201ENST00000452808 512 ntBASIC1.19□□□□□ -2.22
RPL28P46779 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RPL28P46779 AC023194.1-201ENST00000493084 308 ntBASIC1.19□□□□□ -2.22
RPL28P46779 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.19□□□□□ -2.22
RPL28P46779 AC020699.1-201ENST00000505161 445 ntBASIC1.19□□□□□ -2.22
RPL28P46779 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.19□□□□□ -2.22
RPL28P46779 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.19□□□□□ -2.22
RPL28P46779 AC117522.2-201ENST00000510049 657 ntBASIC1.19□□□□□ -2.22
RPL28P46779 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.19□□□□□ -2.22
RPL28P46779 AC009902.1-201ENST00000519351 183 ntBASIC1.19□□□□□ -2.22
RPL28P46779 AC084851.1-201ENST00000529105 249 ntBASIC1.19□□□□□ -2.22
RPL28P46779 CBX3P4-201ENST00000538909 354 ntBASIC1.19□□□□□ -2.22
RPL28P46779 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.19□□□□□ -2.22
RPL28P46779 AC091544.4-201ENST00000555268 342 ntBASIC1.19□□□□□ -2.22
RPL28P46779 MIR4782-201ENST00000577987 79 ntBASIC1.19□□□□□ -2.22
RPL28P46779 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.19□□□□□ -2.22
RPL28P46779 SNRPGP17-201ENST00000603780 214 ntBASIC1.19□□□□□ -2.22
RPL28P46779 AC087045.1-201ENST00000605856 382 ntBASIC1.19□□□□□ -2.22
RPL28P46779 AC084824.5-201ENST00000612009 413 ntBASIC1.19□□□□□ -2.22
RPL28P46779 AC087241.4-201ENST00000612441 480 ntBASIC1.19□□□□□ -2.22
RPL28P46779 AC017037.3-201ENST00000625016 472 ntBASIC1.19□□□□□ -2.22
RPL28P46779 AC131280.1-202ENST00000624067 4211 ntBASIC1.19□□□□□ -2.22
RPL28P46779 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.18□□□□□ -2.22
RPL28P46779 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RPL28P46779 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RPL28P46779 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.18□□□□□ -2.22
RPL28P46779 Y_RNA.311-201ENST00000365068 96 ntBASIC1.18□□□□□ -2.22
RPL28P46779 SNORA67.3-201ENST00000384366 140 ntBASIC1.18□□□□□ -2.22
RPL28P46779 AL133475.1-201ENST00000404414 305 ntBASIC1.18□□□□□ -2.22
RPL28P46779 MIR1283-2-201ENST00000408621 87 ntBASIC1.18□□□□□ -2.22
RPL28P46779 AL359704.1-201ENST00000411586 781 ntBASIC1.18□□□□□ -2.22
RPL28P46779 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.18□□□□□ -2.22
RPL28P46779 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.18□□□□□ -2.22
RPL28P46779 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.18□□□□□ -2.22
RPL28P46779 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.18□□□□□ -2.22
RPL28P46779 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.18□□□□□ -2.22
RPL28P46779 AC087884.1-201ENST00000469738 328 ntBASIC1.18□□□□□ -2.22
RPL28P46779 AC107393.1-201ENST00000512403 346 ntBASIC1.18□□□□□ -2.22
RPL28P46779 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.18□□□□□ -2.22
RPL28P46779 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.18□□□□□ -2.22
RPL28P46779 AP006587.4-201ENST00000526053 529 ntBASIC1.18□□□□□ -2.22
RPL28P46779 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.18□□□□□ -2.22
RPL28P46779 LRRC6P1-201ENST00000532188 885 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms