Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
NKX2-1P43699 U8.11-201ENST00000384699 133 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 U8.12-201ENST00000384701 133 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
NKX2-1P43699 SNORA40C-201ENST00000391285 128 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 AL592114.1-201ENST00000403842 483 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 RNU6ATAC-201ENST00000408749 126 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 AC063979.1-201ENST00000415539 377 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.66□□□□□ -1.98
NKX2-1P43699 AL035423.1-201ENST00000420331 213 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.66□□□□□ -1.98
NKX2-1P43699 AL139413.1-201ENST00000421309 217 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 AL669831.1-202ENST00000428504 417 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 MYL8P-204ENST00000431574 518 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 AL353705.1-201ENST00000433468 480 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 ERLEC1P1-201ENST00000433806 578 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.66□□□□□ -1.98
NKX2-1P43699 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.66□□□□□ -1.98
NKX2-1P43699 GTF2IP13-201ENST00000438487 386 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.66□□□□□ -1.98
NKX2-1P43699 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.66□□□□□ -1.98
NKX2-1P43699 NFU1P2-201ENST00000448700 469 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.66□□□□□ -1.98
NKX2-1P43699 U8.18-201ENST00000459285 133 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 RPL21P41-201ENST00000459863 264 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.66□□□□□ -1.98
NKX2-1P43699 FCF1P8-201ENST00000510322 597 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 SNORA20.3-201ENST00000516880 132 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.66□□□□□ -1.98
NKX2-1P43699 AC078814.3-201ENST00000553036 491 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 OR11H5P-201ENST00000554039 926 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.66□□□□□ -1.98
NKX2-1P43699 H3F3AP1-201ENST00000559984 334 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.66□□□□□ -1.98
NKX2-1P43699 AL035413.2-201ENST00000604801 525 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NKX2-1P43699 U6.42-201ENST00000618440 107 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 AC110079.1-202ENST00000635213 138 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 OR4G1P-203ENST00000641984 1631 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
NKX2-1P43699 FAM35CP-201ENST00000554755 2470 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NKX2-1P43699 ASNSP3-201ENST00000451989 1306 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
NKX2-1P43699 ZNF285B-201ENST00000561698 1767 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NKX2-1P43699 MIR412-201ENST00000362142 91 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 Y_RNA.100-201ENST00000363141 102 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 Y_RNA.167-201ENST00000363735 109 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 RNU6-522P-201ENST00000364497 107 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 Y_RNA.381-201ENST00000365666 102 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
NKX2-1P43699 RNU6-434P-201ENST00000384376 107 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NKX2-1P43699 CISD1P1-201ENST00000393907 327 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 RN7SKP202-201ENST00000410439 330 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 RNU6-1025P-201ENST00000410629 104 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 NDUFB4P5-201ENST00000415445 361 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.65□□□□□ -1.99
NKX2-1P43699 AL645937.1-202ENST00000421799 937 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.65□□□□□ -1.99
NKX2-1P43699 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.65□□□□□ -1.99
NKX2-1P43699 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.65□□□□□ -1.99
NKX2-1P43699 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.65□□□□□ -1.99
NKX2-1P43699 HMGN2P26-201ENST00000463169 339 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.65□□□□□ -1.99
NKX2-1P43699 AC139453.3-201ENST00000493276 369 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 AC093663.1-201ENST00000497190 394 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 MTCO3P9-201ENST00000506989 781 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.65□□□□□ -1.99
NKX2-1P43699 AC113155.1-201ENST00000511141 769 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 RN7SKP282-201ENST00000516824 299 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 SNORD19.2-201ENST00000516978 73 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.65□□□□□ -1.99
NKX2-1P43699 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.65□□□□□ -1.99
NKX2-1P43699 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.65□□□□□ -1.99
NKX2-1P43699 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.65□□□□□ -1.99
NKX2-1P43699 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
NKX2-1P43699 AC010653.1-201ENST00000571108 881 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.65□□□□□ -1.99
NKX2-1P43699 MIR548AC-201ENST00000585049 88 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 AC018638.8-201ENST00000588755 281 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 RPL23AP78-201ENST00000599928 470 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 MTND4LP5-201ENST00000605152 292 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 AC019176.2-201ENST00000611579 315 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
NKX2-1P43699 uc_338.34-201ENST00000617467 174 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 AC103705.1-201ENST00000619013 241 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.65□□□□□ -1.99
NKX2-1P43699 MIR3662-201ENST00000637030 95 ntBASIC2.65□□□□□ -1.99
NKX2-1P43699 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.65□□□□□ -1.99
NKX2-1P43699 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
NKX2-1P43699 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NKX2-1P43699 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
NKX2-1P43699 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.64□□□□□ -1.99
NKX2-1P43699 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.64□□□□□ -1.99
NKX2-1P43699 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.64□□□□□ -1.99
NKX2-1P43699 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NKX2-1P43699 RNA5SP119-201ENST00000362715 117 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms