Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.89□□□□□ -2.11
RFC3P40938 AC009233.1-201ENST00000616477 371 ntBASIC1.89□□□□□ -2.11
RFC3P40938 MIR4509-1-201ENST00000618224 94 ntBASIC1.89□□□□□ -2.11
RFC3P40938 AP000484.1-201ENST00000620067 1252 ntBASIC1.89□□□□□ -2.11
RFC3P40938 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.89□□□□□ -2.11
RFC3P40938 AC099654.9-201ENST00000637055 678 ntBASIC1.89□□□□□ -2.11
RFC3P40938 U6.99-201ENST00000637524 83 ntBASIC1.89□□□□□ -2.11
RFC3P40938 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.89□□□□□ -2.11
RFC3P40938 MTND4P9-201ENST00000507819 1346 ntBASIC1.89□□□□□ -2.11
RFC3P40938 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RFC3P40938 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
RFC3P40938 Z98749.2-208ENST00000381646 500 ntBASIC1.88□□□□□ -2.11
RFC3P40938 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RFC3P40938 RNU6-1176P-201ENST00000390955 107 ntBASIC1.88□□□□□ -2.11
RFC3P40938 SNORA46.1-201ENST00000391069 153 ntBASIC1.88□□□□□ -2.11
RFC3P40938 RNU6-757P-201ENST00000410334 100 ntBASIC1.88□□□□□ -2.11
RFC3P40938 RN7SKP158-201ENST00000410453 326 ntBASIC1.88□□□□□ -2.11
RFC3P40938 AL356379.1-201ENST00000414105 126 ntBASIC1.88□□□□□ -2.11
RFC3P40938 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.88□□□□□ -2.11
RFC3P40938 OR51A5P-201ENST00000415429 942 ntBASIC1.88□□□□□ -2.11
RFC3P40938 AC005005.2-201ENST00000420779 380 ntBASIC1.88□□□□□ -2.11
RFC3P40938 AC097463.2-201ENST00000421074 142 ntBASIC1.88□□□□□ -2.11
RFC3P40938 AL592045.1-201ENST00000429867 352 ntBASIC1.88□□□□□ -2.11
RFC3P40938 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.88□□□□□ -2.11
RFC3P40938 TIMM9P1-201ENST00000436122 256 ntBASIC1.88□□□□□ -2.11
RFC3P40938 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.88□□□□□ -2.11
RFC3P40938 NEFMP1-201ENST00000443423 1006 ntBASIC1.88□□□□□ -2.11
RFC3P40938 PSPHP1-201ENST00000450062 261 ntBASIC1.88□□□□□ -2.11
RFC3P40938 RPL23AP35-201ENST00000451906 501 ntBASIC1.88□□□□□ -2.11
RFC3P40938 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.88□□□□□ -2.11
RFC3P40938 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.88□□□□□ -2.11
RFC3P40938 FCF1P6-201ENST00000456841 595 ntBASIC1.88□□□□□ -2.11
RFC3P40938 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.88□□□□□ -2.11
RFC3P40938 AC118273.2-201ENST00000532092 465 ntBASIC1.88□□□□□ -2.11
RFC3P40938 AC013828.2-201ENST00000532487 235 ntBASIC1.88□□□□□ -2.11
RFC3P40938 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.88□□□□□ -2.11
RFC3P40938 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.88□□□□□ -2.11
RFC3P40938 MIR4769-201ENST00000584126 77 ntBASIC1.88□□□□□ -2.11
RFC3P40938 AC025165.5-201ENST00000602802 578 ntBASIC1.88□□□□□ -2.11
RFC3P40938 SNRPGP19-201ENST00000603826 189 ntBASIC1.88□□□□□ -2.11
RFC3P40938 AC025811.1-201ENST00000604312 472 ntBASIC1.88□□□□□ -2.11
RFC3P40938 AL138963.2-201ENST00000605137 226 ntBASIC1.88□□□□□ -2.11
RFC3P40938 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.88□□□□□ -2.11
RFC3P40938 AC091965.4-201ENST00000607691 587 ntBASIC1.88□□□□□ -2.11
RFC3P40938 AC009269.6-201ENST00000621778 588 ntBASIC1.88□□□□□ -2.11
RFC3P40938 AC093591.3-201ENST00000634516 308 ntBASIC1.88□□□□□ -2.11
RFC3P40938 AL445984.1-201ENST00000637834 659 ntBASIC1.88□□□□□ -2.11
RFC3P40938 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
RFC3P40938 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.88□□□□□ -2.11
RFC3P40938 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RFC3P40938 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.87□□□□□ -2.11
RFC3P40938 Z75746.1-201ENST00000440243 2080 ntBASIC1.87□□□□□ -2.11
RFC3P40938 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RFC3P40938 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RFC3P40938 SNORA16B-201ENST00000364674 135 ntBASIC1.87□□□□□ -2.11
RFC3P40938 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.87□□□□□ -2.11
RFC3P40938 RNU2-2P-201ENST00000410396 191 ntBASIC1.87□□□□□ -2.11
RFC3P40938 AL353621.1-201ENST00000418219 243 ntBASIC1.87□□□□□ -2.11
RFC3P40938 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
RFC3P40938 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.87□□□□□ -2.11
RFC3P40938 TOMM20P4-201ENST00000427861 435 ntBASIC1.87□□□□□ -2.11
RFC3P40938 AC027124.2-201ENST00000428249 105 ntBASIC1.87□□□□□ -2.11
RFC3P40938 AL445646.1-201ENST00000431784 216 ntBASIC1.87□□□□□ -2.11
RFC3P40938 AC084290.1-201ENST00000434995 374 ntBASIC1.87□□□□□ -2.11
RFC3P40938 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.87□□□□□ -2.11
RFC3P40938 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.87□□□□□ -2.11
RFC3P40938 USP9YP25-201ENST00000457708 443 ntBASIC1.87□□□□□ -2.11
RFC3P40938 RPL36AP48-201ENST00000485521 314 ntBASIC1.87□□□□□ -2.11
RFC3P40938 SMURF2P1-201ENST00000514992 481 ntBASIC1.87□□□□□ -2.11
RFC3P40938 RNU6-143P-201ENST00000516942 93 ntBASIC1.87□□□□□ -2.11
RFC3P40938 HSPE1P18-201ENST00000517602 280 ntBASIC1.87□□□□□ -2.11
RFC3P40938 AC105185.1-201ENST00000518705 535 ntBASIC1.87□□□□□ -2.11
RFC3P40938 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.87□□□□□ -2.11
RFC3P40938 AC084851.1-201ENST00000529105 249 ntBASIC1.87□□□□□ -2.11
RFC3P40938 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.87□□□□□ -2.11
RFC3P40938 CYCSP26-201ENST00000534107 320 ntBASIC1.87□□□□□ -2.11
RFC3P40938 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.87□□□□□ -2.11
RFC3P40938 AC008749.1-201ENST00000597650 306 ntBASIC1.87□□□□□ -2.11
RFC3P40938 BNIP3P9-201ENST00000603714 553 ntBASIC1.87□□□□□ -2.11
RFC3P40938 U2.15-201ENST00000611544 191 ntBASIC1.87□□□□□ -2.11
RFC3P40938 U2.16-201ENST00000613119 191 ntBASIC1.87□□□□□ -2.11
RFC3P40938 U2.12-201ENST00000613778 191 ntBASIC1.87□□□□□ -2.11
RFC3P40938 U2.20-201ENST00000613956 192 ntBASIC1.87□□□□□ -2.11
RFC3P40938 U2.9-201ENST00000615427 191 ntBASIC1.87□□□□□ -2.11
RFC3P40938 U2.11-201ENST00000616345 191 ntBASIC1.87□□□□□ -2.11
RFC3P40938 U2.2-201ENST00000616535 191 ntBASIC1.87□□□□□ -2.11
RFC3P40938 U2.3-201ENST00000617785 191 ntBASIC1.87□□□□□ -2.11
RFC3P40938 U2.19-201ENST00000618602 191 ntBASIC1.87□□□□□ -2.11
RFC3P40938 RNU2-1-201ENST00000618664 191 ntBASIC1.87□□□□□ -2.11
RFC3P40938 U2.6-201ENST00000619225 191 ntBASIC1.87□□□□□ -2.11
RFC3P40938 U2.5-201ENST00000619465 191 ntBASIC1.87□□□□□ -2.11
RFC3P40938 U2.10-201ENST00000620268 191 ntBASIC1.87□□□□□ -2.11
RFC3P40938 AC138627.2-201ENST00000624202 601 ntBASIC1.87□□□□□ -2.11
RFC3P40938 TEX21P-201ENST00000447107 1476 ntBASIC1.87□□□□□ -2.11
RFC3P40938 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.87□□□□□ -2.11
RFC3P40938 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
RFC3P40938 RNY4P24-201ENST00000362735 96 ntBASIC1.86□□□□□ -2.11
RFC3P40938 RNA5SP99-201ENST00000364020 114 ntBASIC1.86□□□□□ -2.11
RFC3P40938 RNU2-63P-201ENST00000410792 194 ntBASIC1.86□□□□□ -2.11
RFC3P40938 RNA5SP270-201ENST00000411361 118 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms