Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 HSBP1P2-201ENST00000299671 229 ntBASIC0.61□□□□□ -2.31
SNCAP37840 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
SNCAP37840 RNU6-26P-201ENST00000383985 107 ntBASIC0.61□□□□□ -2.31
SNCAP37840 AL591034.2-201ENST00000402839 359 ntBASIC0.61□□□□□ -2.31
SNCAP37840 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.61□□□□□ -2.31
SNCAP37840 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.61□□□□□ -2.31
SNCAP37840 AC139712.2-201ENST00000424302 339 ntBASIC0.61□□□□□ -2.31
SNCAP37840 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.61□□□□□ -2.31
SNCAP37840 UBE2V2P3-201ENST00000433562 437 ntBASIC0.61□□□□□ -2.31
SNCAP37840 MTND5P15-201ENST00000434246 349 ntBASIC0.61□□□□□ -2.31
SNCAP37840 BOLA3P3-201ENST00000505182 232 ntBASIC0.61□□□□□ -2.31
SNCAP37840 RNU6-113P-201ENST00000516653 101 ntBASIC0.61□□□□□ -2.31
SNCAP37840 RNA5SP291-201ENST00000517222 105 ntBASIC0.61□□□□□ -2.31
SNCAP37840 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.61□□□□□ -2.31
SNCAP37840 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.61□□□□□ -2.31
SNCAP37840 AC125611.1-201ENST00000549563 229 ntBASIC0.61□□□□□ -2.31
SNCAP37840 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.61□□□□□ -2.31
SNCAP37840 AC104984.5-201ENST00000586878 94 ntBASIC0.61□□□□□ -2.31
SNCAP37840 VN1R107P-201ENST00000601784 209 ntBASIC0.61□□□□□ -2.31
SNCAP37840 AC079610.2-201ENST00000604818 690 ntBASIC0.61□□□□□ -2.31
SNCAP37840 AL078604.3-201ENST00000615580 211 ntBASIC0.61□□□□□ -2.31
SNCAP37840 MIR6715A-201ENST00000615929 79 ntBASIC0.61□□□□□ -2.31
SNCAP37840 AC005858.4-201ENST00000623191 700 ntBASIC0.61□□□□□ -2.31
SNCAP37840 AP003400.6-201ENST00000624698 740 ntBASIC0.61□□□□□ -2.31
SNCAP37840 MIR3199-2-201ENST00000636243 86 ntBASIC0.61□□□□□ -2.31
SNCAP37840 MTND1P37-201ENST00000636562 264 ntBASIC0.61□□□□□ -2.31
SNCAP37840 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.61□□□□□ -2.31
SNCAP37840 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.61□□□□□ -2.31
SNCAP37840 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.6□□□□□ -2.31
SNCAP37840 MIR421-201ENST00000365696 85 ntBASIC0.6□□□□□ -2.31
SNCAP37840 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.6□□□□□ -2.31
SNCAP37840 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.6□□□□□ -2.31
SNCAP37840 RNU2-15P-201ENST00000410692 191 ntBASIC0.6□□□□□ -2.31
SNCAP37840 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.6□□□□□ -2.31
SNCAP37840 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.6□□□□□ -2.31
SNCAP37840 AP001324.2-201ENST00000461163 319 ntBASIC0.6□□□□□ -2.31
SNCAP37840 ARL2BPP4-201ENST00000506854 471 ntBASIC0.6□□□□□ -2.31
SNCAP37840 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.6□□□□□ -2.31
SNCAP37840 CYCSP27-201ENST00000527643 293 ntBASIC0.6□□□□□ -2.31
SNCAP37840 NACAP3-201ENST00000552100 481 ntBASIC0.6□□□□□ -2.31
SNCAP37840 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC0.6□□□□□ -2.31
SNCAP37840 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC0.6□□□□□ -2.31
SNCAP37840 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC0.6□□□□□ -2.31
SNCAP37840 SNORA77B-201ENST00000578179 125 ntBASIC0.6□□□□□ -2.31
SNCAP37840 AL713866.2-201ENST00000603579 219 ntBASIC0.6□□□□□ -2.31
SNCAP37840 Z75746.1-201ENST00000440243 2080 ntBASIC0.6□□□□□ -2.31
SNCAP37840 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
SNCAP37840 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SNCAP37840 RNU1-23P-201ENST00000363361 144 ntBASIC0.59□□□□□ -2.31
SNCAP37840 RNU6-392P-201ENST00000364926 101 ntBASIC0.59□□□□□ -2.31
SNCAP37840 SNORA18.2-201ENST00000383865 132 ntBASIC0.59□□□□□ -2.31
SNCAP37840 RNU6-1080P-201ENST00000383982 107 ntBASIC0.59□□□□□ -2.31
SNCAP37840 RNU11-3P-201ENST00000391111 133 ntBASIC0.59□□□□□ -2.31
SNCAP37840 PIGFP2-201ENST00000421400 651 ntBASIC0.59□□□□□ -2.31
SNCAP37840 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.59□□□□□ -2.31
SNCAP37840 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.59□□□□□ -2.31
SNCAP37840 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.59□□□□□ -2.31
SNCAP37840 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.59□□□□□ -2.31
SNCAP37840 AC027119.1-201ENST00000440877 241 ntBASIC0.59□□□□□ -2.31
SNCAP37840 AC244505.5-201ENST00000443639 207 ntBASIC0.59□□□□□ -2.31
SNCAP37840 HMGN1P7-201ENST00000491722 313 ntBASIC0.59□□□□□ -2.31
SNCAP37840 ACA64.5-201ENST00000516207 127 ntBASIC0.59□□□□□ -2.31
SNCAP37840 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.59□□□□□ -2.31
SNCAP37840 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.59□□□□□ -2.31
SNCAP37840 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.59□□□□□ -2.31
SNCAP37840 BNIP3P27-201ENST00000599991 412 ntBASIC0.59□□□□□ -2.31
SNCAP37840 AC211469.2-201ENST00000605461 205 ntBASIC0.59□□□□□ -2.31
SNCAP37840 AP005229.2-201ENST00000609980 697 ntBASIC0.59□□□□□ -2.31
SNCAP37840 AC083865.1-201ENST00000636634 831 ntBASIC0.59□□□□□ -2.31
SNCAP37840 GDI2P1-201ENST00000429312 1336 ntBASIC0.59□□□□□ -2.32
SNCAP37840 MIR597-201ENST00000384968 97 ntBASIC0.58□□□□□ -2.32
SNCAP37840 MIR222-201ENST00000384992 110 ntBASIC0.58□□□□□ -2.32
SNCAP37840 SNORA48.1-201ENST00000390879 135 ntBASIC0.58□□□□□ -2.32
SNCAP37840 AC009518.2-201ENST00000418056 731 ntBASIC0.58□□□□□ -2.32
SNCAP37840 USP9YP26-201ENST00000421008 661 ntBASIC0.58□□□□□ -2.32
SNCAP37840 AC097463.2-201ENST00000421074 142 ntBASIC0.58□□□□□ -2.32
SNCAP37840 USP9YP18-201ENST00000425912 695 ntBASIC0.58□□□□□ -2.32
SNCAP37840 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.58□□□□□ -2.32
SNCAP37840 USP9YP17-201ENST00000444617 696 ntBASIC0.58□□□□□ -2.32
SNCAP37840 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.58□□□□□ -2.32
SNCAP37840 MTCO3P2-201ENST00000457365 171 ntBASIC0.58□□□□□ -2.32
SNCAP37840 AC114982.1-201ENST00000469402 321 ntBASIC0.58□□□□□ -2.32
SNCAP37840 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.58□□□□□ -2.32
SNCAP37840 AP001025.1-201ENST00000486139 332 ntBASIC0.58□□□□□ -2.32
SNCAP37840 MTCYBP16-201ENST00000509187 1129 ntBASIC0.58□□□□□ -2.32
SNCAP37840 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.58□□□□□ -2.32
SNCAP37840 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.58□□□□□ -2.32
SNCAP37840 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.58□□□□□ -2.32
SNCAP37840 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
SNCAP37840 AC002400.1-201ENST00000569310 726 ntBASIC0.58□□□□□ -2.32
SNCAP37840 SNORD39.3-201ENST00000584451 71 ntBASIC0.58□□□□□ -2.32
SNCAP37840 ELOCP5-201ENST00000604924 333 ntBASIC0.58□□□□□ -2.32
SNCAP37840 AL359821.1-201ENST00000605519 182 ntBASIC0.58□□□□□ -2.32
SNCAP37840 AC108706.1-201ENST00000611053 297 ntBASIC0.58□□□□□ -2.32
SNCAP37840 AL589994.2-201ENST00000621124 579 ntBASIC0.58□□□□□ -2.32
SNCAP37840 U2.21-201ENST00000637295 81 ntBASIC0.58□□□□□ -2.32
SNCAP37840 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.58□□□□□ -2.32
SNCAP37840 AC068700.1-201ENST00000565862 3754 ntBASIC0.57□□□□□ -2.32
SNCAP37840 RNU6-1339P-201ENST00000363574 91 ntBASIC0.57□□□□□ -2.32
SNCAP37840 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms