Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.17□□□□□ -2.06
SHMT2P34897 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.17□□□□□ -2.06
SHMT2P34897 AC026464.5-201ENST00000562497 722 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 AC024619.4-201ENST00000580924 316 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 RPS15AP11-201ENST00000594193 385 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 AC073544.2-201ENST00000601155 540 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 AL359999.1-201ENST00000604513 294 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 AC092354.1-201ENST00000606057 376 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.17□□□□□ -2.06
SHMT2P34897 AL365204.3-201ENST00000612448 685 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 MIR7515-201ENST00000637837 67 ntBASIC2.17□□□□□ -2.06
SHMT2P34897 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.17□□□□□ -2.06
SHMT2P34897 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.17□□□□□ -2.06
SHMT2P34897 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.17□□□□□ -2.06
SHMT2P34897 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SHMT2P34897 NACAP2-201ENST00000318548 624 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHMT2P34897 MIRLET7G-201ENST00000362280 84 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 SNORA51.11-201ENST00000384442 131 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 Y_RNA.534-201ENST00000384599 112 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 RNU6-658P-201ENST00000384606 106 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 MIR221-201ENST00000385135 110 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SHMT2P34897 RPS12P24-201ENST00000412619 387 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 Z98742.3-201ENST00000418637 326 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.16□□□□□ -2.06
SHMT2P34897 AC006366.1-201ENST00000422002 759 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 MTND4P20-201ENST00000424125 869 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 AL356583.2-201ENST00000426536 280 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.16□□□□□ -2.06
SHMT2P34897 COX6CP12-201ENST00000446748 202 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.16□□□□□ -2.06
SHMT2P34897 HMGN2P10-201ENST00000448085 265 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 AL353705.4-201ENST00000449661 238 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 KATNBL1P6-201ENST00000453433 915 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 ART2BP-201ENST00000453501 499 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.16□□□□□ -2.06
SHMT2P34897 TRBV1-201ENST00000476502 284 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 AC026801.1-201ENST00000497178 464 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 RNA5SP200-201ENST00000516360 103 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 AC106038.2-201ENST00000520706 568 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 AC006199.1-201ENST00000548728 219 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.16□□□□□ -2.06
SHMT2P34897 NACAP3-201ENST00000552100 481 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 MIR1273D-201ENST00000577266 86 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 MIR3616-201ENST00000584070 92 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 AL391813.1-201ENST00000603098 260 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 AC104763.2-201ENST00000604179 382 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 AC112191.3-201ENST00000604371 277 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.16□□□□□ -2.06
SHMT2P34897 AF246928.1-201ENST00000623768 87 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 Z99571.1-201ENST00000636677 394 ntBASIC2.16□□□□□ -2.06
SHMT2P34897 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHMT2P34897 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHMT2P34897 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
SHMT2P34897 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.16□□□□□ -2.06
SHMT2P34897 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHMT2P34897 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHMT2P34897 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHMT2P34897 MTND5P6-201ENST00000422338 1798 ntBASIC2.15□□□□□ -2.06
SHMT2P34897 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
SHMT2P34897 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
SHMT2P34897 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SHMT2P34897 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.15□□□□□ -2.06
SHMT2P34897 HSPE1P11-201ENST00000339579 310 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 RNU5F-7P-201ENST00000363696 115 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SHMT2P34897 AL031577.2-201ENST00000404133 280 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 RNU4-72P-201ENST00000410754 173 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 AC092809.3-201ENST00000415453 231 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 MTND4P25-201ENST00000441039 533 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.15□□□□□ -2.07
SHMT2P34897 OSTCP8-201ENST00000445117 448 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 AL133217.1-201ENST00000450980 425 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.15□□□□□ -2.07
SHMT2P34897 RNU6-953P-201ENST00000459154 107 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 TRBV12-1-201ENST00000479785 344 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.15□□□□□ -2.07
SHMT2P34897 EIF4EP3-201ENST00000498782 656 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.15□□□□□ -2.07
SHMT2P34897 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.15□□□□□ -2.07
SHMT2P34897 HMGB3P3-201ENST00000510526 400 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.15□□□□□ -2.07
SHMT2P34897 SNORA31.6-201ENST00000516241 130 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 RNU2-10P-201ENST00000516375 211 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 AC009902.1-201ENST00000519351 183 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.15□□□□□ -2.07
SHMT2P34897 COX6CP5-201ENST00000527162 228 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 AC011979.2-201ENST00000527568 352 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.15□□□□□ -2.07
SHMT2P34897 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.15□□□□□ -2.07
SHMT2P34897 AC021739.1-201ENST00000559631 174 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 AC135628.1-201ENST00000568867 534 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 AC009127.3-201ENST00000570531 403 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 HMGN1P30-201ENST00000589286 268 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.15□□□□□ -2.07
SHMT2P34897 AC135507.1-201ENST00000607214 561 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 AC013412.1-201ENST00000610687 192 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms