Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 AC007496.3-201ENST00000624987 3443 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 RNU1-75P-201ENST00000347264 129 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 SNORD3E-201ENST00000362899 217 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 RNU6-639P-201ENST00000384074 107 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 RNU6-214P-201ENST00000384130 107 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 RNU6-574P-201ENST00000384265 107 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 RPS4XP7-201ENST00000406274 780 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 BX842559.1-201ENST00000419615 532 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 NUP35P1-201ENST00000422734 947 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 AL359672.1-201ENST00000442302 409 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 SNORD108-201ENST00000459332 71 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 RPL21P41-201ENST00000459863 264 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 RPL23AP14-201ENST00000468281 468 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 AC108860.1-201ENST00000484521 383 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 AC021146.2-201ENST00000504736 556 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 SMURF2P1-201ENST00000514992 481 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 RNU6-1332P-201ENST00000516666 104 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 RNU6-914P-201ENST00000516749 109 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 SNORA31.20-201ENST00000517111 133 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 RNU1-54P-201ENST00000517181 120 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 RNU6-794P-201ENST00000517261 64 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 AC069113.1-201ENST00000517763 267 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 FAM60BP-201ENST00000578364 658 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 uc_338.22-201ENST00000622722 187 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 AL669831.3-213ENST00000636676 183 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 KPNA2P1-201ENST00000458289 1591 ntBASIC3.16□□□□□ -1.9
TNFRSF1BP20333 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFRSF1BP20333 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TNFRSF1BP20333 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TNFRSF1BP20333 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.15□□□□□ -1.9
TNFRSF1BP20333 Y_RNA.112-201ENST00000363250 102 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TNFRSF1BP20333 AC117470.1-201ENST00000381974 330 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 AL358176.2-201ENST00000425769 204 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.15□□□□□ -1.91
TNFRSF1BP20333 ARF4P2-201ENST00000430209 526 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 AL137792.2-201ENST00000443484 235 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.15□□□□□ -1.91
TNFRSF1BP20333 AC087588.1-201ENST00000462203 316 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 AP000873.1-201ENST00000463987 400 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 RN7SL132P-201ENST00000478131 296 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 AL049830.2-201ENST00000480072 201 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 RPS15AP34-201ENST00000487776 387 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 HMGN1P11-201ENST00000508668 303 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 RNU6-976P-201ENST00000516086 111 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 RNU6-988P-201ENST00000519081 107 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.15□□□□□ -1.91
TNFRSF1BP20333 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.15□□□□□ -1.91
TNFRSF1BP20333 AC100830.2-201ENST00000581636 240 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 AC012119.1-201ENST00000603184 222 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 AC019193.3-201ENST00000609144 554 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 AC107294.1-201ENST00000609524 467 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 MIR6128-201ENST00000615528 109 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 PISRT1.1-201ENST00000616930 107 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 7SK.10-201ENST00000621414 298 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 AL360181.4-201ENST00000621752 134 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 U6.98-201ENST00000637157 84 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.15□□□□□ -1.91
TNFRSF1BP20333 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.15□□□□□ -1.91
TNFRSF1BP20333 MTND5P16-201ENST00000460269 1703 ntBASIC3.15□□□□□ -1.91
TNFRSF1BP20333 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
TNFRSF1BP20333 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
TNFRSF1BP20333 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
TNFRSF1BP20333 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TNFRSF1BP20333 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TNFRSF1BP20333 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TNFRSF1BP20333 USP8P1-201ENST00000494673 3183 ntBASIC3.14□□□□□ -1.91
TNFRSF1BP20333 DEFB108F-201ENST00000344638 222 ntBASIC3.14□□□□□ -1.91
TNFRSF1BP20333 RNU6-266P-201ENST00000364225 107 ntBASIC3.14□□□□□ -1.91
TNFRSF1BP20333 SNORA22B-201ENST00000383876 138 ntBASIC3.14□□□□□ -1.91
TNFRSF1BP20333 Y_RNA.534-201ENST00000384599 112 ntBASIC3.14□□□□□ -1.91
TNFRSF1BP20333 RNU6-310P-201ENST00000384655 107 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms