Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC090136.1-201ENST00000520009 240 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.99□□□□□ -1.77
SNRPA1P09661 AP003072.1-201ENST00000531740 145 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 AC018630.1-201ENST00000541376 925 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 ZNF192P1-203ENST00000565888 810 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.99□□□□□ -1.77
SNRPA1P09661 AC005951.2-201ENST00000576282 495 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 POLR3GP2-201ENST00000588366 668 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 SNRPGP15-201ENST00000600149 222 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 AC078795.3-201ENST00000602913 472 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.99□□□□□ -1.77
SNRPA1P09661 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SNRPA1P09661 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.99□□□□□ -1.77
SNRPA1P09661 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNRPA1P09661 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNRPA1P09661 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.98□□□□□ -1.77
SNRPA1P09661 PWAR6-201ENST00000552334 4618 ntBASIC3.98□□□□□ -1.77
SNRPA1P09661 SNORD6-201ENST00000365444 73 ntBASIC3.98□□□□□ -1.77
SNRPA1P09661 RNU6-629P-201ENST00000384061 103 ntBASIC3.98□□□□□ -1.77
SNRPA1P09661 RNA5SP219-201ENST00000390940 113 ntBASIC3.98□□□□□ -1.77
SNRPA1P09661 RNU6-55P-201ENST00000411092 107 ntBASIC3.98□□□□□ -1.77
SNRPA1P09661 RNU6-954P-201ENST00000411355 107 ntBASIC3.98□□□□□ -1.77
SNRPA1P09661 CALM2P2-201ENST00000428512 440 ntBASIC3.98□□□□□ -1.77
SNRPA1P09661 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.98□□□□□ -1.77
SNRPA1P09661 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.98□□□□□ -1.77
SNRPA1P09661 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.98□□□□□ -1.77
SNRPA1P09661 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.98□□□□□ -1.77
SNRPA1P09661 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.98□□□□□ -1.77
SNRPA1P09661 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.98□□□□□ -1.77
SNRPA1P09661 SNORA70.14-201ENST00000516205 110 ntBASIC3.98□□□□□ -1.77
SNRPA1P09661 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.98□□□□□ -1.77
SNRPA1P09661 OR11H5P-201ENST00000554039 926 ntBASIC3.98□□□□□ -1.77
SNRPA1P09661 AL121821.2-201ENST00000556081 394 ntBASIC3.98□□□□□ -1.77
SNRPA1P09661 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.98□□□□□ -1.77
SNRPA1P09661 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.98□□□□□ -1.77
SNRPA1P09661 AL138889.2-201ENST00000603883 242 ntBASIC3.98□□□□□ -1.77
SNRPA1P09661 SDR42E1P2-201ENST00000614861 481 ntBASIC3.98□□□□□ -1.77
SNRPA1P09661 AC091903.1-201ENST00000624322 454 ntBASIC3.98□□□□□ -1.77
SNRPA1P09661 AL137790.1-201ENST00000634283 177 ntBASIC3.98□□□□□ -1.77
SNRPA1P09661 AL137003.2-201ENST00000606924 2538 ntBASIC3.98□□□□□ -1.77
SNRPA1P09661 AC121333.1-201ENST00000567488 2709 ntBASIC3.98□□□□□ -1.77
SNRPA1P09661 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SNRPA1P09661 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNRPA1P09661 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
SNRPA1P09661 RNU6-335P-201ENST00000364563 113 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 RNU6-76P-201ENST00000384060 104 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 RNU6-190P-201ENST00000384154 102 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 RNU6-1013P-201ENST00000384180 107 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 CISD1P1-201ENST00000393907 327 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 MIR548F5-201ENST00000408421 86 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 RNU4-14P-201ENST00000410858 122 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.97□□□□□ -1.77
SNRPA1P09661 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.97□□□□□ -1.77
SNRPA1P09661 SAR1AP4-201ENST00000429225 591 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 AC236972.2-201ENST00000434979 310 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.97□□□□□ -1.77
SNRPA1P09661 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.97□□□□□ -1.77
SNRPA1P09661 AC104058.1-201ENST00000448028 297 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 SNORD19B-201ENST00000459623 84 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 RPL7P43-201ENST00000478876 753 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 TBCAP3-201ENST00000512475 312 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.97□□□□□ -1.77
SNRPA1P09661 FRG2DP-202ENST00000566967 323 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.97□□□□□ -1.77
SNRPA1P09661 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.97□□□□□ -1.77
SNRPA1P09661 MIR4425-201ENST00000580572 84 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 AC022432.1-201ENST00000595739 310 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.97□□□□□ -1.77
SNRPA1P09661 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.97□□□□□ -1.77
SNRPA1P09661 AC126177.8-201ENST00000618339 1015 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 MIR6852-201ENST00000621699 66 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 AC007496.3-201ENST00000624987 3443 ntBASIC3.97□□□□□ -1.77
SNRPA1P09661 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.97□□□□□ -1.77
SNRPA1P09661 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNRPA1P09661 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.77
SNRPA1P09661 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SNRPA1P09661 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SNRPA1P09661 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.96□□□□□ -1.78
SNRPA1P09661 MIR22-201ENST00000362190 85 ntBASIC3.96□□□□□ -1.78
SNRPA1P09661 RNU6-288P-201ENST00000363690 104 ntBASIC3.96□□□□□ -1.78
SNRPA1P09661 SNORD113-7-201ENST00000363762 77 ntBASIC3.96□□□□□ -1.78
SNRPA1P09661 RNU6-82P-201ENST00000363970 107 ntBASIC3.96□□□□□ -1.78
SNRPA1P09661 Y_RNA.259-201ENST00000364619 101 ntBASIC3.96□□□□□ -1.78
SNRPA1P09661 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SNRPA1P09661 RNU6-14P-201ENST00000384630 106 ntBASIC3.96□□□□□ -1.78
SNRPA1P09661 SNORD67-201ENST00000390833 111 ntBASIC3.96□□□□□ -1.78
SNRPA1P09661 AL139039.1-201ENST00000401900 692 ntBASIC3.96□□□□□ -1.78
SNRPA1P09661 SNORA11.2-201ENST00000408318 127 ntBASIC3.96□□□□□ -1.78
SNRPA1P09661 MIR1289-1-201ENST00000408836 144 ntBASIC3.96□□□□□ -1.78
SNRPA1P09661 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.96□□□□□ -1.78
SNRPA1P09661 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.96□□□□□ -1.78
SNRPA1P09661 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.96□□□□□ -1.78
SNRPA1P09661 RPL26P6-201ENST00000440913 438 ntBASIC3.96□□□□□ -1.78
SNRPA1P09661 SNRPGP3-201ENST00000469405 227 ntBASIC3.96□□□□□ -1.78
SNRPA1P09661 VN1R17P-201ENST00000472048 1090 ntBASIC3.96□□□□□ -1.78
SNRPA1P09661 TRBVA-201ENST00000498804 316 ntBASIC3.96□□□□□ -1.78
SNRPA1P09661 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.96□□□□□ -1.78
SNRPA1P09661 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.96□□□□□ -1.78
SNRPA1P09661 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SNRPA1P09661 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms