Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 MICF-203ENST00000432679 129 ntBASIC1.42□□□□□ -2.18
COL4A2P08572 EXOSC3P1-201ENST00000448649 500 ntBASIC1.42□□□□□ -2.18
COL4A2P08572 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.42□□□□□ -2.18
COL4A2P08572 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.42□□□□□ -2.18
COL4A2P08572 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.42□□□□□ -2.18
COL4A2P08572 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.42□□□□□ -2.18
COL4A2P08572 RNU6-390P-201ENST00000516259 103 ntBASIC1.42□□□□□ -2.18
COL4A2P08572 RNA5SP290-201ENST00000517133 127 ntBASIC1.42□□□□□ -2.18
COL4A2P08572 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.42□□□□□ -2.18
COL4A2P08572 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.42□□□□□ -2.18
COL4A2P08572 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.42□□□□□ -2.18
COL4A2P08572 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.42□□□□□ -2.18
COL4A2P08572 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.42□□□□□ -2.18
COL4A2P08572 AL391261.3-201ENST00000557194 520 ntBASIC1.42□□□□□ -2.18
COL4A2P08572 AC090888.1-201ENST00000561335 1141 ntBASIC1.42□□□□□ -2.18
COL4A2P08572 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.42□□□□□ -2.18
COL4A2P08572 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.42□□□□□ -2.18
COL4A2P08572 MIR3122-201ENST00000577243 73 ntBASIC1.42□□□□□ -2.18
COL4A2P08572 MIR4452-201ENST00000583004 71 ntBASIC1.42□□□□□ -2.18
COL4A2P08572 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.42□□□□□ -2.18
COL4A2P08572 AC069431.2-201ENST00000604149 1099 ntBASIC1.42□□□□□ -2.18
COL4A2P08572 AC005014.3-201ENST00000605985 190 ntBASIC1.42□□□□□ -2.18
COL4A2P08572 AL121652.1-201ENST00000608851 448 ntBASIC1.42□□□□□ -2.18
COL4A2P08572 AC097478.2-201ENST00000610572 514 ntBASIC1.42□□□□□ -2.18
COL4A2P08572 AL356596.1-201ENST00000624230 379 ntBASIC1.42□□□□□ -2.18
COL4A2P08572 MTND4P27-201ENST00000450813 1354 ntBASIC1.42□□□□□ -2.18
COL4A2P08572 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
COL4A2P08572 CCT4P2-201ENST00000233836 1548 ntBASIC1.42□□□□□ -2.18
COL4A2P08572 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
COL4A2P08572 AC009902.3-201ENST00000606235 2172 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
COL4A2P08572 SNORD114-26-201ENST00000363543 72 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 RNU6-884P-201ENST00000363889 107 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 Y_RNA.234-201ENST00000364409 97 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 Y_RNA.245-201ENST00000364493 95 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 RNU1-93P-201ENST00000364704 169 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 RNA5SP363-201ENST00000365072 115 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 RPL21P24-201ENST00000413752 448 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.41□□□□□ -2.18
COL4A2P08572 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.41□□□□□ -2.18
COL4A2P08572 EEF1A1P39-201ENST00000440791 250 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 ATG12P2-201ENST00000456830 416 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.41□□□□□ -2.18
COL4A2P08572 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.41□□□□□ -2.18
COL4A2P08572 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.41□□□□□ -2.18
COL4A2P08572 RBM43P1-201ENST00000476891 1081 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.41□□□□□ -2.18
COL4A2P08572 RPL7P18-201ENST00000478965 734 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 AC134050.1-201ENST00000495088 933 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 AC110760.3-202ENST00000515177 371 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 AC022447.1-201ENST00000515358 464 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.41□□□□□ -2.18
COL4A2P08572 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
COL4A2P08572 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
COL4A2P08572 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.41□□□□□ -2.18
COL4A2P08572 MIR5571-201ENST00000577998 113 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 MIR3199-1-201ENST00000582434 88 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.41□□□□□ -2.18
COL4A2P08572 AC002545.1-201ENST00000592511 181 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 AC007349.4-201ENST00000608114 532 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
COL4A2P08572 AC008498.1-201ENST00000613012 531 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 uc_338.12-201ENST00000616344 181 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
COL4A2P08572 AC099786.3-201ENST00000565735 1410 ntBASIC1.41□□□□□ -2.18
COL4A2P08572 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
COL4A2P08572 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
COL4A2P08572 RNU6-462P-201ENST00000362659 105 ntBASIC1.4□□□□□ -2.18
COL4A2P08572 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.4□□□□□ -2.18
COL4A2P08572 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.4□□□□□ -2.18
COL4A2P08572 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.4□□□□□ -2.18
COL4A2P08572 MTCO2P20-201ENST00000437339 673 ntBASIC1.4□□□□□ -2.18
COL4A2P08572 AL031313.1-201ENST00000448435 256 ntBASIC1.4□□□□□ -2.18
COL4A2P08572 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.4□□□□□ -2.18
COL4A2P08572 AC026801.1-201ENST00000497178 464 ntBASIC1.4□□□□□ -2.18
COL4A2P08572 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
COL4A2P08572 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.4□□□□□ -2.18
COL4A2P08572 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.4□□□□□ -2.18
COL4A2P08572 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.4□□□□□ -2.18
COL4A2P08572 AC060771.1-201ENST00000582031 164 ntBASIC1.4□□□□□ -2.18
COL4A2P08572 AP000403.1-201ENST00000603349 851 ntBASIC1.4□□□□□ -2.18
COL4A2P08572 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.4□□□□□ -2.18
COL4A2P08572 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.4□□□□□ -2.18
COL4A2P08572 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.4□□□□□ -2.18
COL4A2P08572 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
COL4A2P08572 Y_RNA.192-201ENST00000363977 102 ntBASIC1.4□□□□□ -2.19
COL4A2P08572 RNU1-39P-201ENST00000383897 165 ntBASIC1.4□□□□□ -2.19
COL4A2P08572 ERHP2-201ENST00000402323 299 ntBASIC1.4□□□□□ -2.19
COL4A2P08572 BPY2DP-201ENST00000422208 265 ntBASIC1.4□□□□□ -2.19
COL4A2P08572 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.4□□□□□ -2.19
COL4A2P08572 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.4□□□□□ -2.19
COL4A2P08572 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.4□□□□□ -2.19
COL4A2P08572 FCF1P6-201ENST00000456841 595 ntBASIC1.4□□□□□ -2.19
COL4A2P08572 AC010631.1-201ENST00000474150 156 ntBASIC1.4□□□□□ -2.19
COL4A2P08572 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.4□□□□□ -2.19
COL4A2P08572 AC022493.1-201ENST00000492984 337 ntBASIC1.4□□□□□ -2.19
COL4A2P08572 SUMO2P6-201ENST00000505273 288 ntBASIC1.4□□□□□ -2.19
COL4A2P08572 RNA5SP216-201ENST00000516111 123 ntBASIC1.4□□□□□ -2.19
COL4A2P08572 CYCSP2-201ENST00000558168 301 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms