Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.32□□□□□ -1.56
ALDH1A1P00352 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.32□□□□□ -1.56
ALDH1A1P00352 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.32□□□□□ -1.56
ALDH1A1P00352 AC009296.1-201ENST00000443146 155 ntBASIC5.32□□□□□ -1.56
ALDH1A1P00352 BX276092.4-201ENST00000452056 248 ntBASIC5.32□□□□□ -1.56
ALDH1A1P00352 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.32□□□□□ -1.56
ALDH1A1P00352 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.32□□□□□ -1.56
ALDH1A1P00352 AC020890.1-201ENST00000491837 504 ntBASIC5.32□□□□□ -1.56
ALDH1A1P00352 AL132838.2-201ENST00000492041 314 ntBASIC5.32□□□□□ -1.56
ALDH1A1P00352 AC073073.1-201ENST00000493920 463 ntBASIC5.32□□□□□ -1.56
ALDH1A1P00352 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.32□□□□□ -1.56
ALDH1A1P00352 RNU6-1095P-201ENST00000516148 108 ntBASIC5.32□□□□□ -1.56
ALDH1A1P00352 RNU6-927P-201ENST00000516199 100 ntBASIC5.32□□□□□ -1.56
ALDH1A1P00352 RNU6-567P-201ENST00000516746 107 ntBASIC5.32□□□□□ -1.56
ALDH1A1P00352 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.32□□□□□ -1.56
ALDH1A1P00352 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.32□□□□□ -1.56
ALDH1A1P00352 AC093249.4-201ENST00000564755 259 ntBASIC5.32□□□□□ -1.56
ALDH1A1P00352 MIR3613-201ENST00000579844 87 ntBASIC5.32□□□□□ -1.56
ALDH1A1P00352 MIR3944-201ENST00000581277 108 ntBASIC5.32□□□□□ -1.56
ALDH1A1P00352 AL360181.4-201ENST00000621752 134 ntBASIC5.32□□□□□ -1.56
ALDH1A1P00352 snoU18.1-201ENST00000629629 71 ntBASIC5.32□□□□□ -1.56
ALDH1A1P00352 LINC01109-201ENST00000603837 3081 ntBASIC5.32□□□□□ -1.56
ALDH1A1P00352 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ALDH1A1P00352 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
ALDH1A1P00352 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
ALDH1A1P00352 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.32□□□□□ -1.56
ALDH1A1P00352 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.32□□□□□ -1.56
ALDH1A1P00352 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.31□□□□□ -1.56
ALDH1A1P00352 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
ALDH1A1P00352 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.31□□□□□ -1.56
ALDH1A1P00352 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
ALDH1A1P00352 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
ALDH1A1P00352 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ALDH1A1P00352 MIR412-201ENST00000362142 91 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 Y_RNA.182-201ENST00000363880 111 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 RNU6-1175P-201ENST00000365200 107 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 RNU6-429P-201ENST00000384582 108 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 Y_RNA.563-201ENST00000384707 108 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 RNA5SP372-201ENST00000390836 115 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 PTMAP2-201ENST00000397627 327 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 RNA5SP56-201ENST00000410277 118 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.31□□□□□ -1.56
ALDH1A1P00352 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC5.31□□□□□ -1.56
ALDH1A1P00352 AC099670.2-201ENST00000435130 321 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.31□□□□□ -1.56
ALDH1A1P00352 SNORA25.12-201ENST00000516202 82 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC5.31□□□□□ -1.56
ALDH1A1P00352 MIR4286-201ENST00000580651 93 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.31□□□□□ -1.56
ALDH1A1P00352 AC008121.1-201ENST00000603244 268 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 AC006254.2-201ENST00000603259 279 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 AP001005.3-201ENST00000622049 129 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 AC112484.5-201ENST00000624189 228 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.31□□□□□ -1.56
ALDH1A1P00352 SCARNA4-201ENST00000629045 128 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.31□□□□□ -1.56
ALDH1A1P00352 NCAPGP1-201ENST00000505112 1814 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.31□□□□□ -1.56
ALDH1A1P00352 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
ALDH1A1P00352 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.31□□□□□ -1.56
ALDH1A1P00352 AC008079.2-201ENST00000623543 20396 ntBASIC5.31□□□□□ -1.56
ALDH1A1P00352 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ALDH1A1P00352 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ALDH1A1P00352 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
ALDH1A1P00352 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
ALDH1A1P00352 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
ALDH1A1P00352 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ALDH1A1P00352 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
ALDH1A1P00352 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
ALDH1A1P00352 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ALDH1A1P00352 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
ALDH1A1P00352 Y_RNA.230-201ENST00000364348 109 ntBASIC5.3□□□□□ -1.56
ALDH1A1P00352 SNORD14B-201ENST00000364533 90 ntBASIC5.3□□□□□ -1.56
ALDH1A1P00352 RNU6-741P-201ENST00000383889 107 ntBASIC5.3□□□□□ -1.56
ALDH1A1P00352 SNORA20-201ENST00000384662 132 ntBASIC5.3□□□□□ -1.56
ALDH1A1P00352 WARS2P1-201ENST00000429678 537 ntBASIC5.3□□□□□ -1.56
ALDH1A1P00352 AC011742.1-201ENST00000431448 434 ntBASIC5.3□□□□□ -1.56
ALDH1A1P00352 AC104164.2-201ENST00000496953 495 ntBASIC5.3□□□□□ -1.56
ALDH1A1P00352 RNU6-143P-201ENST00000516942 93 ntBASIC5.3□□□□□ -1.56
ALDH1A1P00352 RNA5SP471-201ENST00000516971 106 ntBASIC5.3□□□□□ -1.56
ALDH1A1P00352 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.3□□□□□ -1.56
ALDH1A1P00352 AC008739.3-201ENST00000603262 127 ntBASIC5.3□□□□□ -1.56
ALDH1A1P00352 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ALDH1A1P00352 AC006001.4-201ENST00000622243 395 ntBASIC5.3□□□□□ -1.56
ALDH1A1P00352 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.3□□□□□ -1.56
ALDH1A1P00352 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
ALDH1A1P00352 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ALDH1A1P00352 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ALDH1A1P00352 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
ALDH1A1P00352 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.3□□□□□ -1.56
ALDH1A1P00352 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
ALDH1A1P00352 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ALDH1A1P00352 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ALDH1A1P00352 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ALDH1A1P00352 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ALDH1A1P00352 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.3□□□□□ -1.56
ALDH1A1P00352 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.29□□□□□ -1.56
ALDH1A1P00352 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.29□□□□□ -1.56
ALDH1A1P00352 AC008568.2-201ENST00000623862 2313 ntBASIC5.29□□□□□ -1.56
ALDH1A1P00352 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms