Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SNORA9.3-201ENST00000516383 129 ntBASIC3.22□□□□□ -1.89
MBD4O95243 RNU6-430P-201ENST00000517078 107 ntBASIC3.22□□□□□ -1.89
MBD4O95243 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.22□□□□□ -1.89
MBD4O95243 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.22□□□□□ -1.89
MBD4O95243 MTCYBP20-201ENST00000524239 1129 ntBASIC3.22□□□□□ -1.89
MBD4O95243 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.22□□□□□ -1.89
MBD4O95243 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MBD4O95243 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MBD4O95243 MIR3913-1-201ENST00000577744 102 ntBASIC3.22□□□□□ -1.89
MBD4O95243 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.22□□□□□ -1.89
MBD4O95243 NBR2-204ENST00000587322 63 ntBASIC3.22□□□□□ -1.89
MBD4O95243 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.22□□□□□ -1.89
MBD4O95243 AL391813.1-201ENST00000603098 260 ntBASIC3.22□□□□□ -1.89
MBD4O95243 LRRC77P-213ENST00000637727 880 ntBASIC3.22□□□□□ -1.89
MBD4O95243 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
MBD4O95243 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.22□□□□□ -1.89
MBD4O95243 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
MBD4O95243 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
MBD4O95243 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MBD4O95243 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.21□□□□□ -1.9
MBD4O95243 AL356057.2-201ENST00000403318 432 ntBASIC3.21□□□□□ -1.9
MBD4O95243 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.21□□□□□ -1.9
MBD4O95243 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.21□□□□□ -1.9
MBD4O95243 MYL8P-204ENST00000431574 518 ntBASIC3.21□□□□□ -1.9
MBD4O95243 MTCO3P5-201ENST00000433620 714 ntBASIC3.21□□□□□ -1.9
MBD4O95243 AL161651.1-201ENST00000440882 223 ntBASIC3.21□□□□□ -1.9
MBD4O95243 AC079448.1-201ENST00000449377 373 ntBASIC3.21□□□□□ -1.9
MBD4O95243 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.21□□□□□ -1.9
MBD4O95243 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.21□□□□□ -1.9
MBD4O95243 UBE2DNL-203ENST00000474922 222 ntBASIC3.21□□□□□ -1.9
MBD4O95243 MTND4P2-201ENST00000507767 1203 ntBASIC3.21□□□□□ -1.9
MBD4O95243 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.21□□□□□ -1.9
MBD4O95243 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.21□□□□□ -1.9
MBD4O95243 AL121821.2-201ENST00000556081 394 ntBASIC3.21□□□□□ -1.9
MBD4O95243 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.21□□□□□ -1.9
MBD4O95243 AL391840.1-201ENST00000571144 367 ntBASIC3.21□□□□□ -1.9
MBD4O95243 RSL24D1P11-201ENST00000591045 491 ntBASIC3.21□□□□□ -1.9
MBD4O95243 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.21□□□□□ -1.9
MBD4O95243 RPL12P50-201ENST00000603116 116 ntBASIC3.21□□□□□ -1.9
MBD4O95243 RN7SKP299-201ENST00000606679 301 ntBASIC3.21□□□□□ -1.9
MBD4O95243 MIR6134-201ENST00000617606 109 ntBASIC3.21□□□□□ -1.9
MBD4O95243 AC099842.1-201ENST00000619919 596 ntBASIC3.21□□□□□ -1.9
MBD4O95243 AC093648.1-201ENST00000623546 606 ntBASIC3.21□□□□□ -1.9
MBD4O95243 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MBD4O95243 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
MBD4O95243 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
MBD4O95243 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
MBD4O95243 MIR627-201ENST00000384979 97 ntBASIC3.2□□□□□ -1.9
MBD4O95243 AL513475.1-201ENST00000406602 315 ntBASIC3.2□□□□□ -1.9
MBD4O95243 OR51A5P-201ENST00000415429 942 ntBASIC3.2□□□□□ -1.9
MBD4O95243 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.2□□□□□ -1.9
MBD4O95243 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.2□□□□□ -1.9
MBD4O95243 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.2□□□□□ -1.9
MBD4O95243 MTND2P22-201ENST00000444325 1033 ntBASIC3.2□□□□□ -1.9
MBD4O95243 UBBP3-201ENST00000445497 241 ntBASIC3.2□□□□□ -1.9
MBD4O95243 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.2□□□□□ -1.9
MBD4O95243 AL590639.1-201ENST00000456484 337 ntBASIC3.2□□□□□ -1.9
MBD4O95243 AC107626.1-201ENST00000471084 183 ntBASIC3.2□□□□□ -1.9
MBD4O95243 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.2□□□□□ -1.9
MBD4O95243 RNU5F-8P-201ENST00000515941 111 ntBASIC3.2□□□□□ -1.9
MBD4O95243 RNU6-685P-201ENST00000517088 95 ntBASIC3.2□□□□□ -1.9
MBD4O95243 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.2□□□□□ -1.9
MBD4O95243 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.2□□□□□ -1.9
MBD4O95243 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.2□□□□□ -1.9
MBD4O95243 LINC00933-203ENST00000559812 219 ntBASIC3.2□□□□□ -1.9
MBD4O95243 AC006362.1-201ENST00000567392 174 ntBASIC3.2□□□□□ -1.9
MBD4O95243 AC008521.1-201ENST00000587471 187 ntBASIC3.2□□□□□ -1.9
MBD4O95243 AC126118.1-201ENST00000607744 628 ntBASIC3.2□□□□□ -1.9
MBD4O95243 AL589743.7-201ENST00000612637 233 ntBASIC3.2□□□□□ -1.9
MBD4O95243 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MBD4O95243 CDC27P3-201ENST00000635418 1910 ntBASIC3.2□□□□□ -1.9
MBD4O95243 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MBD4O95243 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MBD4O95243 AC108206.1-201ENST00000570186 4159 ntBASIC3.19□□□□□ -1.9
MBD4O95243 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.19□□□□□ -1.9
MBD4O95243 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.19□□□□□ -1.9
MBD4O95243 RNU6-1083P-201ENST00000384022 107 ntBASIC3.19□□□□□ -1.9
MBD4O95243 RNU6-74P-201ENST00000384235 107 ntBASIC3.19□□□□□ -1.9
MBD4O95243 MIR454-201ENST00000390180 115 ntBASIC3.19□□□□□ -1.9
MBD4O95243 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
MBD4O95243 UBE2V1P2-201ENST00000397758 440 ntBASIC3.19□□□□□ -1.9
MBD4O95243 BMS1P22-201ENST00000414726 313 ntBASIC3.19□□□□□ -1.9
MBD4O95243 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.19□□□□□ -1.9
MBD4O95243 AC236972.1-201ENST00000433225 199 ntBASIC3.19□□□□□ -1.9
MBD4O95243 AC233279.1-201ENST00000455300 423 ntBASIC3.19□□□□□ -1.9
MBD4O95243 C1DP4-201ENST00000455429 424 ntBASIC3.19□□□□□ -1.9
MBD4O95243 EIF4EP3-201ENST00000498782 656 ntBASIC3.19□□□□□ -1.9
MBD4O95243 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.19□□□□□ -1.9
MBD4O95243 RN7SKP298-201ENST00000515950 94 ntBASIC3.19□□□□□ -1.9
MBD4O95243 SNORD27.1-201ENST00000516319 72 ntBASIC3.19□□□□□ -1.9
MBD4O95243 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.19□□□□□ -1.9
MBD4O95243 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.19□□□□□ -1.9
MBD4O95243 MIR3162-201ENST00000581818 82 ntBASIC3.19□□□□□ -1.9
MBD4O95243 MIR4635-201ENST00000583759 79 ntBASIC3.19□□□□□ -1.9
MBD4O95243 MIR548AC-201ENST00000585049 88 ntBASIC3.19□□□□□ -1.9
MBD4O95243 AP001486.3-201ENST00000615334 372 ntBASIC3.19□□□□□ -1.9
MBD4O95243 U6.114-201ENST00000636407 96 ntBASIC3.19□□□□□ -1.9
MBD4O95243 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
MBD4O95243 AC004944.1-201ENST00000517807 3059 ntBASIC3.19□□□□□ -1.9
MBD4O95243 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms