Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL590705.4-201ENST00000532209 134 ntBASIC0.13□□□□□ -2.39
USH2AO75445 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.13□□□□□ -2.39
USH2AO75445 AC009220.3-201ENST00000604318 586 ntBASIC0.13□□□□□ -2.39
USH2AO75445 ZNF663P-202ENST00000641770 1131 ntBASIC0.13□□□□□ -2.39
USH2AO75445 U3.9-201ENST00000363823 204 ntBASIC0.13□□□□□ -2.39
USH2AO75445 BTF3L4P2-201ENST00000392798 346 ntBASIC0.13□□□□□ -2.39
USH2AO75445 OR6C72P-201ENST00000451403 892 ntBASIC0.13□□□□□ -2.39
USH2AO75445 AC243772.1-201ENST00000451620 410 ntBASIC0.13□□□□□ -2.39
USH2AO75445 AC093770.1-201ENST00000511559 571 ntBASIC0.13□□□□□ -2.39
USH2AO75445 RNU6-1334P-201ENST00000516032 105 ntBASIC0.13□□□□□ -2.39
USH2AO75445 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.13□□□□□ -2.39
USH2AO75445 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.13□□□□□ -2.39
USH2AO75445 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.13□□□□□ -2.39
USH2AO75445 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.13□□□□□ -2.39
USH2AO75445 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
USH2AO75445 MIR618-201ENST00000385287 98 ntBASIC0.13□□□□□ -2.39
USH2AO75445 MIR1285-2-201ENST00000408311 88 ntBASIC0.13□□□□□ -2.39
USH2AO75445 PIGPP2-201ENST00000411569 458 ntBASIC0.13□□□□□ -2.39
USH2AO75445 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.13□□□□□ -2.39
USH2AO75445 NDUFB4P10-201ENST00000452541 359 ntBASIC0.13□□□□□ -2.39
USH2AO75445 EIF4EP3-201ENST00000498782 656 ntBASIC0.13□□□□□ -2.39
USH2AO75445 AC016256.1-201ENST00000547971 354 ntBASIC0.13□□□□□ -2.39
USH2AO75445 HSBP1P1-201ENST00000555205 166 ntBASIC0.13□□□□□ -2.39
USH2AO75445 AC023824.2-201ENST00000566185 400 ntBASIC0.13□□□□□ -2.39
USH2AO75445 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.13□□□□□ -2.39
USH2AO75445 AL136363.1-201ENST00000605349 337 ntBASIC0.13□□□□□ -2.39
USH2AO75445 PRR13P7-201ENST00000605538 430 ntBASIC0.13□□□□□ -2.39
USH2AO75445 AC009318.3-201ENST00000616916 503 ntBASIC0.13□□□□□ -2.39
USH2AO75445 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.13□□□□□ -2.39
USH2AO75445 SNORA3A-201ENST00000364113 130 ntBASIC0.12□□□□□ -2.39
USH2AO75445 SNORA63D-201ENST00000364359 132 ntBASIC0.12□□□□□ -2.39
USH2AO75445 MIR10B-201ENST00000385011 110 ntBASIC0.12□□□□□ -2.39
USH2AO75445 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.12□□□□□ -2.39
USH2AO75445 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.12□□□□□ -2.39
USH2AO75445 USP9YP24-201ENST00000434374 697 ntBASIC0.12□□□□□ -2.39
USH2AO75445 MTND4LP12-201ENST00000448237 295 ntBASIC0.12□□□□□ -2.39
USH2AO75445 AC087477.1-201ENST00000465747 340 ntBASIC0.12□□□□□ -2.39
USH2AO75445 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.12□□□□□ -2.39
USH2AO75445 RPL21P103-201ENST00000479921 488 ntBASIC0.12□□□□□ -2.39
USH2AO75445 NDUFB4P2-201ENST00000509515 391 ntBASIC0.12□□□□□ -2.39
USH2AO75445 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.12□□□□□ -2.39
USH2AO75445 MIR4529-201ENST00000578110 78 ntBASIC0.12□□□□□ -2.39
USH2AO75445 AC078899.2-201ENST00000595282 212 ntBASIC0.12□□□□□ -2.39
USH2AO75445 AC084824.5-201ENST00000612009 413 ntBASIC0.12□□□□□ -2.39
USH2AO75445 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.12□□□□□ -2.39
USH2AO75445 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.12□□□□□ -2.39
USH2AO75445 CIR1P3-201ENST00000405137 479 ntBASIC0.12□□□□□ -2.39
USH2AO75445 RPL21P111-201ENST00000418453 477 ntBASIC0.12□□□□□ -2.39
USH2AO75445 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
USH2AO75445 RNU1-72P-201ENST00000362976 153 ntBASIC0.12□□□□□ -2.39
USH2AO75445 MIR146A-201ENST00000385201 99 ntBASIC0.12□□□□□ -2.39
USH2AO75445 AC083875.1-201ENST00000419509 405 ntBASIC0.12□□□□□ -2.39
USH2AO75445 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.12□□□□□ -2.39
USH2AO75445 OSTCP8-201ENST00000445117 448 ntBASIC0.12□□□□□ -2.39
USH2AO75445 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.12□□□□□ -2.39
USH2AO75445 MIR3681-201ENST00000580089 72 ntBASIC0.12□□□□□ -2.39
USH2AO75445 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.12□□□□□ -2.39
USH2AO75445 RNU6-674P-201ENST00000363831 107 ntBASIC0.12□□□□□ -2.39
USH2AO75445 AL355615.1-201ENST00000406187 641 ntBASIC0.12□□□□□ -2.39
USH2AO75445 SCARNA21.1-201ENST00000515996 128 ntBASIC0.12□□□□□ -2.39
USH2AO75445 ERHP1-201ENST00000523006 310 ntBASIC0.12□□□□□ -2.39
USH2AO75445 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.12□□□□□ -2.39
USH2AO75445 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.12□□□□□ -2.39
USH2AO75445 AC016925.2-201ENST00000605108 242 ntBASIC0.12□□□□□ -2.39
USH2AO75445 PART1_2.1-201ENST00000612397 250 ntBASIC0.12□□□□□ -2.39
USH2AO75445 AC106800.4-201ENST00000614905 153 ntBASIC0.12□□□□□ -2.39
USH2AO75445 CD24P4-201ENST00000382840 243 ntBASIC0.11□□□□□ -2.39
USH2AO75445 RNU6-46P-201ENST00000383860 107 ntBASIC0.11□□□□□ -2.39
USH2AO75445 RNU2-63P-201ENST00000410792 194 ntBASIC0.11□□□□□ -2.39
USH2AO75445 RNU4-63P-201ENST00000411313 118 ntBASIC0.11□□□□□ -2.39
USH2AO75445 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.11□□□□□ -2.39
USH2AO75445 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC0.11□□□□□ -2.39
USH2AO75445 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.11□□□□□ -2.39
USH2AO75445 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.11□□□□□ -2.39
USH2AO75445 AC008834.1-201ENST00000511612 175 ntBASIC0.11□□□□□ -2.39
USH2AO75445 SCARNA11.3-201ENST00000517276 130 ntBASIC0.11□□□□□ -2.39
USH2AO75445 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.11□□□□□ -2.39
USH2AO75445 MIR4661-201ENST00000582720 75 ntBASIC0.11□□□□□ -2.39
USH2AO75445 MIR8064-201ENST00000612863 90 ntBASIC0.11□□□□□ -2.39
USH2AO75445 AC123767.1-202ENST00000620407 817 ntBASIC0.11□□□□□ -2.39
USH2AO75445 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.11□□□□□ -2.39
USH2AO75445 MTND4P16-201ENST00000466108 1367 ntBASIC0.11□□□□□ -2.39
USH2AO75445 RNU6-920P-201ENST00000410926 92 ntBASIC0.11□□□□□ -2.39
USH2AO75445 RPL30P13-201ENST00000418873 348 ntBASIC0.11□□□□□ -2.39
USH2AO75445 MTATP6P4-201ENST00000427725 675 ntBASIC0.11□□□□□ -2.39
USH2AO75445 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.11□□□□□ -2.39
USH2AO75445 SNORA44.1-201ENST00000517031 108 ntBASIC0.11□□□□□ -2.39
USH2AO75445 RNU2-12P-201ENST00000517216 168 ntBASIC0.11□□□□□ -2.39
USH2AO75445 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.11□□□□□ -2.39
USH2AO75445 LINC02211-204ENST00000642024 1070 ntBASIC0.11□□□□□ -2.39
USH2AO75445 SNORA25.8-201ENST00000364831 128 ntBASIC0.11□□□□□ -2.39
USH2AO75445 RNU6-657P-201ENST00000383904 107 ntBASIC0.11□□□□□ -2.39
USH2AO75445 SNORD26-201ENST00000384147 75 ntBASIC0.11□□□□□ -2.39
USH2AO75445 AL606490.4-201ENST00000423117 127 ntBASIC0.11□□□□□ -2.39
USH2AO75445 AL645638.1-201ENST00000440519 361 ntBASIC0.11□□□□□ -2.39
USH2AO75445 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.11□□□□□ -2.39
USH2AO75445 AC090616.3-201ENST00000582184 217 ntBASIC0.11□□□□□ -2.39
USH2AO75445 MIR4441-201ENST00000582623 100 ntBASIC0.11□□□□□ -2.39
USH2AO75445 Z75746.1-201ENST00000440243 2080 ntBASIC0.11□□□□□ -2.39
USH2AO75445 MTND5P32-201ENST00000560711 1802 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms