Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNU6-1213P-201ENST00000517075 94 ntBASIC4.49□□□□□ -1.69
VAMP4O75379 SNORD84-203ENST00000584275 78 ntBASIC4.49□□□□□ -1.69
VAMP4O75379 AC034102.8-201ENST00000615146 484 ntBASIC4.49□□□□□ -1.69
VAMP4O75379 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.49□□□□□ -1.69
VAMP4O75379 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
VAMP4O75379 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
VAMP4O75379 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.49□□□□□ -1.69
VAMP4O75379 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VAMP4O75379 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.49□□□□□ -1.69
VAMP4O75379 MFSD8-233ENST00000641482 4860 ntBASIC4.49□□□□□ -1.69
VAMP4O75379 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VAMP4O75379 SDAD1P2-201ENST00000441308 2028 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.48□□□□□ -1.69
VAMP4O75379 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VAMP4O75379 RNU4-35P-201ENST00000362588 141 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 RNA5SP235-201ENST00000365411 114 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 RNU6-1074P-201ENST00000383995 104 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 MIR218-2-201ENST00000385006 110 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 SNORA75.6-201ENST00000391318 127 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 RNU6-985P-201ENST00000410182 104 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 RNU2-37P-201ENST00000410695 177 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.48□□□□□ -1.69
VAMP4O75379 MCFD2P1-201ENST00000417812 300 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 AL590632.1-201ENST00000424289 371 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 IPO7P1-201ENST00000442031 636 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 RPS29P31-201ENST00000446147 164 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VAMP4O75379 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.48□□□□□ -1.69
VAMP4O75379 SNORD5.1-201ENST00000458800 75 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 AC078918.1-201ENST00000498515 228 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 AC009901.1-201ENST00000506703 541 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 RNU2-27P-201ENST00000516185 142 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 RNU6-927P-201ENST00000516199 100 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.48□□□□□ -1.69
VAMP4O75379 IGKV2-26-201ENST00000518305 343 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
VAMP4O75379 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.48□□□□□ -1.69
VAMP4O75379 AC023442.1-201ENST00000531247 422 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.48□□□□□ -1.69
VAMP4O75379 AL355836.1-201ENST00000555951 870 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.48□□□□□ -1.69
VAMP4O75379 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.48□□□□□ -1.69
VAMP4O75379 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.48□□□□□ -1.69
VAMP4O75379 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 AL132822.1-201ENST00000617063 513 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.48□□□□□ -1.69
VAMP4O75379 AC048347.1-201ENST00000624621 427 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VAMP4O75379 MTND5P1-201ENST00000445440 1375 ntBASIC4.48□□□□□ -1.69
VAMP4O75379 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.48□□□□□ -1.69
VAMP4O75379 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VAMP4O75379 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
VAMP4O75379 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.47□□□□□ -1.69
VAMP4O75379 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VAMP4O75379 MTND5P30-201ENST00000452896 1731 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 AC106871.1-201ENST00000568324 3102 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
VAMP4O75379 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.47□□□□□ -1.69
VAMP4O75379 SNORD62.1-201ENST00000362541 86 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 RNU6-890P-201ENST00000384121 107 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 Y_RNA.463-201ENST00000384271 102 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 Y_RNA.534-201ENST00000384599 112 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 AL356057.3-201ENST00000402607 340 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 SNRPEP4-201ENST00000435815 279 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.47□□□□□ -1.69
VAMP4O75379 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VAMP4O75379 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.47□□□□□ -1.69
VAMP4O75379 CEACAMP4-201ENST00000457676 421 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 MIR2053-201ENST00000459295 91 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 AC087588.1-201ENST00000462203 316 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.47□□□□□ -1.69
VAMP4O75379 HSPE1P6-201ENST00000479457 291 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 AC096745.1-201ENST00000509945 370 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 Y_RNA.670-201ENST00000516255 105 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 RNU6-914P-201ENST00000516749 109 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.47□□□□□ -1.69
VAMP4O75379 OR5D17P-201ENST00000531492 978 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 AC005951.2-201ENST00000576282 495 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 AC009229.3-201ENST00000608056 282 ntBASIC4.47□□□□□ -1.69
VAMP4O75379 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VAMP4O75379 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
VAMP4O75379 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.47□□□□□ -1.69
VAMP4O75379 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
VAMP4O75379 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.46□□□□□ -1.69
VAMP4O75379 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
VAMP4O75379 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
VAMP4O75379 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
VAMP4O75379 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.46□□□□□ -1.7
VAMP4O75379 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VAMP4O75379 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
VAMP4O75379 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VAMP4O75379 Y_RNA.404-201ENST00000383978 102 ntBASIC4.46□□□□□ -1.7
VAMP4O75379 MIR183-201ENST00000384958 110 ntBASIC4.46□□□□□ -1.7
VAMP4O75379 MIR670-201ENST00000390142 98 ntBASIC4.46□□□□□ -1.7
VAMP4O75379 MRPL42P3-201ENST00000401492 326 ntBASIC4.46□□□□□ -1.7
VAMP4O75379 Y_RNA.594-201ENST00000410373 140 ntBASIC4.46□□□□□ -1.7
VAMP4O75379 Z99755.1-201ENST00000414048 380 ntBASIC4.46□□□□□ -1.7
VAMP4O75379 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.46□□□□□ -1.7
VAMP4O75379 UBE2V1P4-201ENST00000425374 344 ntBASIC4.46□□□□□ -1.7
VAMP4O75379 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms