Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AC121247.2-201ENST00000604776 136 ntBASIC2.45□□□□□ -2.02
SDC3O75056 AP002360.4-201ENST00000606980 481 ntBASIC2.45□□□□□ -2.02
SDC3O75056 AC135507.1-201ENST00000607214 561 ntBASIC2.45□□□□□ -2.02
SDC3O75056 AC008147.4-201ENST00000617570 1204 ntBASIC2.45□□□□□ -2.02
SDC3O75056 AL589994.2-201ENST00000621124 579 ntBASIC2.45□□□□□ -2.02
SDC3O75056 AC078883.4-201ENST00000623218 367 ntBASIC2.45□□□□□ -2.02
SDC3O75056 AC097520.1-201ENST00000624435 385 ntBASIC2.45□□□□□ -2.02
SDC3O75056 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.45□□□□□ -2.02
SDC3O75056 AC006020.1-201ENST00000420179 1854 ntBASIC2.45□□□□□ -2.02
SDC3O75056 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SDC3O75056 ADAM3A-203ENST00000461344 2157 ntBASIC2.44□□□□□ -2.02
SDC3O75056 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SDC3O75056 SNORD56.2-201ENST00000363242 71 ntBASIC2.44□□□□□ -2.02
SDC3O75056 DEFA7P-201ENST00000382676 285 ntBASIC2.44□□□□□ -2.02
SDC3O75056 RNU1-138P-201ENST00000384093 164 ntBASIC2.44□□□□□ -2.02
SDC3O75056 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SDC3O75056 RPS3AP3-201ENST00000411933 242 ntBASIC2.44□□□□□ -2.02
SDC3O75056 RPS12P24-201ENST00000412619 387 ntBASIC2.44□□□□□ -2.02
SDC3O75056 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.44□□□□□ -2.02
SDC3O75056 AL353729.1-201ENST00000425044 720 ntBASIC2.44□□□□□ -2.02
SDC3O75056 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SDC3O75056 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.44□□□□□ -2.02
SDC3O75056 AC104389.3-201ENST00000445629 235 ntBASIC2.44□□□□□ -2.02
SDC3O75056 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SDC3O75056 MTATP6P7-201ENST00000453315 681 ntBASIC2.44□□□□□ -2.02
SDC3O75056 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SDC3O75056 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.44□□□□□ -2.02
SDC3O75056 BET1P1-201ENST00000482276 359 ntBASIC2.44□□□□□ -2.02
SDC3O75056 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.44□□□□□ -2.02
SDC3O75056 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.44□□□□□ -2.02
SDC3O75056 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.44□□□□□ -2.02
SDC3O75056 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.44□□□□□ -2.02
SDC3O75056 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.44□□□□□ -2.02
SDC3O75056 AC008088.1-201ENST00000580993 280 ntBASIC2.44□□□□□ -2.02
SDC3O75056 AC068276.1-201ENST00000605793 379 ntBASIC2.44□□□□□ -2.02
SDC3O75056 CR381653.2-201ENST00000624041 768 ntBASIC2.44□□□□□ -2.02
SDC3O75056 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.44□□□□□ -2.02
SDC3O75056 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SDC3O75056 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SDC3O75056 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SDC3O75056 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.43□□□□□ -2.02
SDC3O75056 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SDC3O75056 AC073343.1-201ENST00000328239 651 ntBASIC2.43□□□□□ -2.02
SDC3O75056 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SDC3O75056 RNU6-188P-201ENST00000364207 107 ntBASIC2.43□□□□□ -2.02
SDC3O75056 Y_RNA.534-201ENST00000384599 112 ntBASIC2.43□□□□□ -2.02
SDC3O75056 RNU6-658P-201ENST00000384606 106 ntBASIC2.43□□□□□ -2.02
SDC3O75056 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SDC3O75056 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.43□□□□□ -2.02
SDC3O75056 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.43□□□□□ -2.02
SDC3O75056 HMGN1P14-201ENST00000412459 517 ntBASIC2.43□□□□□ -2.02
SDC3O75056 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.43□□□□□ -2.02
SDC3O75056 AC080125.1-201ENST00000414888 684 ntBASIC2.43□□□□□ -2.02
SDC3O75056 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.43□□□□□ -2.02
SDC3O75056 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.43□□□□□ -2.02
SDC3O75056 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.43□□□□□ -2.02
SDC3O75056 MTND1P26-201ENST00000440488 538 ntBASIC2.43□□□□□ -2.02
SDC3O75056 MTND4P25-201ENST00000441039 533 ntBASIC2.43□□□□□ -2.02
SDC3O75056 ST13P20-201ENST00000447996 1065 ntBASIC2.43□□□□□ -2.02
SDC3O75056 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.43□□□□□ -2.02
SDC3O75056 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.43□□□□□ -2.02
SDC3O75056 snoU13.26-201ENST00000459452 105 ntBASIC2.43□□□□□ -2.02
SDC3O75056 RAP1BP2-201ENST00000478270 544 ntBASIC2.43□□□□□ -2.02
SDC3O75056 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.43□□□□□ -2.02
SDC3O75056 AC090096.1-201ENST00000489168 390 ntBASIC2.43□□□□□ -2.02
SDC3O75056 AC007182.2-201ENST00000489251 402 ntBASIC2.43□□□□□ -2.02
SDC3O75056 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.43□□□□□ -2.02
SDC3O75056 RPS29P21-201ENST00000496272 170 ntBASIC2.43□□□□□ -2.02
SDC3O75056 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.43□□□□□ -2.02
SDC3O75056 AC234781.5-201ENST00000508429 271 ntBASIC2.43□□□□□ -2.02
SDC3O75056 RNU6-677P-201ENST00000516914 101 ntBASIC2.43□□□□□ -2.02
SDC3O75056 RNU2-46P-201ENST00000517038 113 ntBASIC2.43□□□□□ -2.02
SDC3O75056 AC060788.1-201ENST00000521318 469 ntBASIC2.43□□□□□ -2.02
SDC3O75056 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.43□□□□□ -2.02
SDC3O75056 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.43□□□□□ -2.02
SDC3O75056 AC012414.6-201ENST00000568241 401 ntBASIC2.43□□□□□ -2.02
SDC3O75056 MIR4446-201ENST00000578505 67 ntBASIC2.43□□□□□ -2.02
SDC3O75056 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.43□□□□□ -2.02
SDC3O75056 MIR3616-201ENST00000584070 92 ntBASIC2.43□□□□□ -2.02
SDC3O75056 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.43□□□□□ -2.02
SDC3O75056 BNIP3P9-201ENST00000603714 553 ntBASIC2.43□□□□□ -2.02
SDC3O75056 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.43□□□□□ -2.02
SDC3O75056 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.43□□□□□ -2.02
SDC3O75056 AC080128.1-201ENST00000474389 1917 ntBASIC2.42□□□□□ -2.02
SDC3O75056 FGF7P2-201ENST00000332473 296 ntBASIC2.42□□□□□ -2.02
SDC3O75056 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.42□□□□□ -2.02
SDC3O75056 RNU6-946P-201ENST00000383878 107 ntBASIC2.42□□□□□ -2.02
SDC3O75056 RNU6-1083P-201ENST00000384022 107 ntBASIC2.42□□□□□ -2.02
SDC3O75056 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.42□□□□□ -2.02
SDC3O75056 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.42□□□□□ -2.02
SDC3O75056 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.42□□□□□ -2.02
SDC3O75056 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.42□□□□□ -2.02
SDC3O75056 MTATP6P17-201ENST00000431030 672 ntBASIC2.42□□□□□ -2.02
SDC3O75056 AL591704.1-201ENST00000432574 275 ntBASIC2.42□□□□□ -2.02
SDC3O75056 FDX1P2-201ENST00000450769 375 ntBASIC2.42□□□□□ -2.02
SDC3O75056 RPS27AP8-201ENST00000452665 445 ntBASIC2.42□□□□□ -2.02
SDC3O75056 RNU7-26P-201ENST00000458980 63 ntBASIC2.42□□□□□ -2.02
SDC3O75056 snoU109.1-201ENST00000459339 135 ntBASIC2.42□□□□□ -2.02
SDC3O75056 SNORD42A-201ENST00000459584 64 ntBASIC2.42□□□□□ -2.02
SDC3O75056 AL121769.1-201ENST00000469473 401 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms