Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.84□□□□□ -1.95
SSX4O60224 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
SSX4O60224 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSX4O60224 ELF2P3-201ENST00000445099 1506 ntBASIC2.83□□□□□ -1.96
SSX4O60224 RNU6-996P-201ENST00000365438 107 ntBASIC2.83□□□□□ -1.96
SSX4O60224 MIR578-201ENST00000384828 96 ntBASIC2.83□□□□□ -1.96
SSX4O60224 RNU6-192P-201ENST00000391253 100 ntBASIC2.83□□□□□ -1.96
SSX4O60224 RNU6-903P-201ENST00000391270 109 ntBASIC2.83□□□□□ -1.96
SSX4O60224 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SSX4O60224 MIR887-201ENST00000401258 79 ntBASIC2.83□□□□□ -1.96
SSX4O60224 AL122016.1-201ENST00000403365 367 ntBASIC2.83□□□□□ -1.96
SSX4O60224 AL357075.1-201ENST00000404107 726 ntBASIC2.83□□□□□ -1.96
SSX4O60224 RN7SKP58-201ENST00000411010 305 ntBASIC2.83□□□□□ -1.96
SSX4O60224 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.83□□□□□ -1.96
SSX4O60224 AC098614.2-201ENST00000426040 255 ntBASIC2.83□□□□□ -1.96
SSX4O60224 MYL8P-204ENST00000431574 518 ntBASIC2.83□□□□□ -1.96
SSX4O60224 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.83□□□□□ -1.96
SSX4O60224 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.83□□□□□ -1.96
SSX4O60224 CACYBPP2-201ENST00000453625 678 ntBASIC2.83□□□□□ -1.96
SSX4O60224 RPL21P41-201ENST00000459863 264 ntBASIC2.83□□□□□ -1.96
SSX4O60224 AC022493.1-201ENST00000492984 337 ntBASIC2.83□□□□□ -1.96
SSX4O60224 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.83□□□□□ -1.96
SSX4O60224 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.83□□□□□ -1.96
SSX4O60224 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.83□□□□□ -1.96
SSX4O60224 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.83□□□□□ -1.96
SSX4O60224 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.83□□□□□ -1.96
SSX4O60224 SNORA31.19-201ENST00000517079 126 ntBASIC2.83□□□□□ -1.96
SSX4O60224 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.83□□□□□ -1.96
SSX4O60224 PSMA2P1-201ENST00000526365 646 ntBASIC2.83□□□□□ -1.96
SSX4O60224 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.83□□□□□ -1.96
SSX4O60224 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.83□□□□□ -1.96
SSX4O60224 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.83□□□□□ -1.96
SSX4O60224 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.83□□□□□ -1.96
SSX4O60224 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.83□□□□□ -1.96
SSX4O60224 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.83□□□□□ -1.96
SSX4O60224 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.83□□□□□ -1.96
SSX4O60224 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.83□□□□□ -1.96
SSX4O60224 MIR4325-201ENST00000583049 90 ntBASIC2.83□□□□□ -1.96
SSX4O60224 MIR548AC-201ENST00000585049 88 ntBASIC2.83□□□□□ -1.96
SSX4O60224 AC146944.4-201ENST00000602697 718 ntBASIC2.83□□□□□ -1.96
SSX4O60224 AL021997.1-201ENST00000605757 193 ntBASIC2.83□□□□□ -1.96
SSX4O60224 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.83□□□□□ -1.96
SSX4O60224 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.83□□□□□ -1.96
SSX4O60224 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSX4O60224 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSX4O60224 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.83□□□□□ -1.96
SSX4O60224 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SSX4O60224 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SSX4O60224 AC006020.1-201ENST00000420179 1854 ntBASIC2.82□□□□□ -1.96
SSX4O60224 AC110491.1-201ENST00000562191 2010 ntBASIC2.82□□□□□ -1.96
SSX4O60224 RNU6-371P-201ENST00000364283 108 ntBASIC2.82□□□□□ -1.96
SSX4O60224 RNU6-1322P-201ENST00000364309 107 ntBASIC2.82□□□□□ -1.96
SSX4O60224 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SSX4O60224 Y_RNA.481-201ENST00000384373 102 ntBASIC2.82□□□□□ -1.96
SSX4O60224 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SSX4O60224 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SSX4O60224 SNORA40C-201ENST00000391285 128 ntBASIC2.82□□□□□ -1.96
SSX4O60224 UBA52P6-201ENST00000399822 382 ntBASIC2.82□□□□□ -1.96
SSX4O60224 RNU2-29P-201ENST00000410423 189 ntBASIC2.82□□□□□ -1.96
SSX4O60224 RNU4-46P-201ENST00000410818 138 ntBASIC2.82□□□□□ -1.96
SSX4O60224 AC023141.4-201ENST00000412031 328 ntBASIC2.82□□□□□ -1.96
SSX4O60224 AF274854.1-201ENST00000413236 615 ntBASIC2.82□□□□□ -1.96
SSX4O60224 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.82□□□□□ -1.96
SSX4O60224 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.82□□□□□ -1.96
SSX4O60224 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.82□□□□□ -1.96
SSX4O60224 AL139281.1-201ENST00000422120 335 ntBASIC2.82□□□□□ -1.96
SSX4O60224 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SSX4O60224 AC007560.1-201ENST00000426912 237 ntBASIC2.82□□□□□ -1.96
SSX4O60224 HMGB1P9-201ENST00000429856 646 ntBASIC2.82□□□□□ -1.96
SSX4O60224 C8orf59P1-201ENST00000429930 303 ntBASIC2.82□□□□□ -1.96
SSX4O60224 AC000111.3-201ENST00000433478 193 ntBASIC2.82□□□□□ -1.96
SSX4O60224 AC016691.1-201ENST00000441321 413 ntBASIC2.82□□□□□ -1.96
SSX4O60224 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.82□□□□□ -1.96
SSX4O60224 Z99127.3-201ENST00000448158 395 ntBASIC2.82□□□□□ -1.96
SSX4O60224 AC073415.1-201ENST00000449240 153 ntBASIC2.82□□□□□ -1.96
SSX4O60224 RN7SL499P-201ENST00000481141 276 ntBASIC2.82□□□□□ -1.96
SSX4O60224 AL163973.1-201ENST00000484753 577 ntBASIC2.82□□□□□ -1.96
SSX4O60224 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.82□□□□□ -1.96
SSX4O60224 AC112206.3-201ENST00000514578 389 ntBASIC2.82□□□□□ -1.96
SSX4O60224 RNA5SP341-201ENST00000516261 117 ntBASIC2.82□□□□□ -1.96
SSX4O60224 SNORA40.12-201ENST00000516329 111 ntBASIC2.82□□□□□ -1.96
SSX4O60224 Y_RNA.693-201ENST00000516641 110 ntBASIC2.82□□□□□ -1.96
SSX4O60224 RNU6-1183P-201ENST00000517054 60 ntBASIC2.82□□□□□ -1.96
SSX4O60224 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.82□□□□□ -1.96
SSX4O60224 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.82□□□□□ -1.96
SSX4O60224 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.82□□□□□ -1.96
SSX4O60224 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.82□□□□□ -1.96
SSX4O60224 AL512360.1-201ENST00000555346 234 ntBASIC2.82□□□□□ -1.96
SSX4O60224 MIR5004-201ENST00000579078 107 ntBASIC2.82□□□□□ -1.96
SSX4O60224 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.82□□□□□ -1.96
SSX4O60224 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.82□□□□□ -1.96
SSX4O60224 AL451007.1-201ENST00000595491 289 ntBASIC2.82□□□□□ -1.96
SSX4O60224 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.82□□□□□ -1.96
SSX4O60224 AC007621.1-201ENST00000604544 437 ntBASIC2.82□□□□□ -1.96
SSX4O60224 AC122108.2-201ENST00000611946 526 ntBASIC2.82□□□□□ -1.96
SSX4O60224 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
SSX4O60224 AC110079.1-202ENST00000635213 138 ntBASIC2.82□□□□□ -1.96
SSX4O60224 ASNSP3-201ENST00000451989 1306 ntBASIC2.82□□□□□ -1.96
SSX4O60224 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SSX4O60224 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms