Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RPL23AP11-201ENST00000475260 469 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.32□□□□□ -1.88
SMAD6O43541 RNU2-10P-201ENST00000516375 211 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 Y_RNA.682-201ENST00000516457 100 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 RNU6-273P-201ENST00000516937 96 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.32□□□□□ -1.88
SMAD6O43541 AP000857.1-201ENST00000532151 543 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 AL133271.1-201ENST00000538229 291 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.32□□□□□ -1.88
SMAD6O43541 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.32□□□□□ -1.88
SMAD6O43541 MIR5583-1-201ENST00000580941 59 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.32□□□□□ -1.88
SMAD6O43541 BNIP3P25-201ENST00000596023 559 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 AC008737.2-201ENST00000599446 118 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 AC124303.1-201ENST00000605703 360 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.32□□□□□ -1.88
SMAD6O43541 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.32□□□□□ -1.88
SMAD6O43541 AC006111.3-201ENST00000622137 383 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 AC110801.1-201ENST00000623590 212 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.32□□□□□ -1.88
SMAD6O43541 MIR7153-201ENST00000637758 57 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 MTND4P14-201ENST00000435799 1354 ntBASIC3.32□□□□□ -1.88
SMAD6O43541 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SMAD6O43541 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SMAD6O43541 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SMAD6O43541 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.32□□□□□ -1.88
SMAD6O43541 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SMAD6O43541 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
SMAD6O43541 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SMAD6O43541 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.31□□□□□ -1.88
SMAD6O43541 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.31□□□□□ -1.88
SMAD6O43541 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SMAD6O43541 Y_RNA.145-201ENST00000363527 102 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 Y_RNA.167-201ENST00000363735 109 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 SNORA38.1-201ENST00000364172 131 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 Y_RNA.378-201ENST00000365652 113 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SMAD6O43541 Y_RNA.445-201ENST00000384168 102 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 MIR491-201ENST00000384877 84 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 U3.19-201ENST00000390893 196 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 U3.29-201ENST00000391296 212 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 UBE2V1P2-201ENST00000397758 440 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 MIR548F5-201ENST00000408421 86 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 RNU2-36P-201ENST00000410361 191 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 RNA5SP31-201ENST00000411144 127 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.31□□□□□ -1.88
SMAD6O43541 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.31□□□□□ -1.88
SMAD6O43541 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.31□□□□□ -1.88
SMAD6O43541 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.31□□□□□ -1.88
SMAD6O43541 RNU7-59P-201ENST00000459101 61 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 AC091179.1-201ENST00000461606 579 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 HMGB1P25-201ENST00000468402 607 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.31□□□□□ -1.88
SMAD6O43541 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.31□□□□□ -1.88
SMAD6O43541 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.31□□□□□ -1.88
SMAD6O43541 CCDC34P1-201ENST00000507441 517 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.31□□□□□ -1.88
SMAD6O43541 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.31□□□□□ -1.88
SMAD6O43541 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.31□□□□□ -1.88
SMAD6O43541 AL133153.1-201ENST00000557756 303 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SMAD6O43541 AC136443.5-201ENST00000603741 370 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 AC016925.2-201ENST00000605108 242 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 AC073657.2-201ENST00000605661 303 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 AC092807.2-201ENST00000609367 243 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 AC002076.2-201ENST00000617362 122 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 uc_338.34-201ENST00000617467 174 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 SNORD39.4-201ENST00000620099 78 ntBASIC3.31□□□□□ -1.88
SMAD6O43541 AL355596.1-201ENST00000565399 3996 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SMAD6O43541 Y_RNA.31-201ENST00000362574 102 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 RNVU1-3-201ENST00000364313 161 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 RNU6-1013P-201ENST00000384180 107 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 Y_RNA.459-201ENST00000384251 102 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SMAD6O43541 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SMAD6O43541 AL136372.1-201ENST00000403060 228 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 MIR548K-201ENST00000408406 116 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 RNA5SP229-201ENST00000410809 99 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.3□□□□□ -1.88
SMAD6O43541 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.3□□□□□ -1.88
SMAD6O43541 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.3□□□□□ -1.88
SMAD6O43541 RPL23AP83-201ENST00000434984 473 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 TXNP1-201ENST00000441872 371 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 AC020550.1-201ENST00000447385 163 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.3□□□□□ -1.88
SMAD6O43541 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.3□□□□□ -1.88
SMAD6O43541 SNRPFP3-201ENST00000457792 225 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 RNU6-1208P-201ENST00000459588 107 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.3□□□□□ -1.88
SMAD6O43541 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SMAD6O43541 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.3□□□□□ -1.88
SMAD6O43541 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.3□□□□□ -1.88
SMAD6O43541 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.3□□□□□ -1.88
SMAD6O43541 AC017037.2-201ENST00000513850 890 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 RNU6-1046P-201ENST00000516538 107 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 RNU6-1088P-201ENST00000516850 104 ntBASIC3.3□□□□□ -1.88
SMAD6O43541 MTND4P7-201ENST00000523876 130 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms