Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.61□□□□□ -1.83
PROM1O43490 PISRT1.1-201ENST00000616930 107 ntBASIC3.61□□□□□ -1.83
PROM1O43490 AL354798.1-201ENST00000622505 329 ntBASIC3.61□□□□□ -1.83
PROM1O43490 AC091953.5-201ENST00000622919 233 ntBASIC3.61□□□□□ -1.83
PROM1O43490 FP236240.3-201ENST00000623061 327 ntBASIC3.61□□□□□ -1.83
PROM1O43490 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.61□□□□□ -1.83
PROM1O43490 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.61□□□□□ -1.83
PROM1O43490 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.61□□□□□ -1.83
PROM1O43490 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
PROM1O43490 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.61□□□□□ -1.83
PROM1O43490 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PROM1O43490 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PROM1O43490 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PROM1O43490 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.6□□□□□ -1.83
PROM1O43490 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PROM1O43490 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PROM1O43490 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PROM1O43490 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PROM1O43490 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.6□□□□□ -1.83
PROM1O43490 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PROM1O43490 Y_RNA.395-201ENST00000383945 109 ntBASIC3.6□□□□□ -1.83
PROM1O43490 RNU6-128P-201ENST00000383976 107 ntBASIC3.6□□□□□ -1.83
PROM1O43490 RNU6-639P-201ENST00000384074 107 ntBASIC3.6□□□□□ -1.83
PROM1O43490 RNU6-310P-201ENST00000384655 107 ntBASIC3.6□□□□□ -1.83
PROM1O43490 AL591034.1-201ENST00000407447 340 ntBASIC3.6□□□□□ -1.83
PROM1O43490 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.6□□□□□ -1.83
PROM1O43490 RPL21P90-201ENST00000415692 466 ntBASIC3.6□□□□□ -1.83
PROM1O43490 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.6□□□□□ -1.83
PROM1O43490 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.6□□□□□ -1.83
PROM1O43490 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.6□□□□□ -1.83
PROM1O43490 MTCO1P39-201ENST00000426148 480 ntBASIC3.6□□□□□ -1.83
PROM1O43490 AC008264.1-201ENST00000447612 367 ntBASIC3.6□□□□□ -1.83
PROM1O43490 ELOCP24-201ENST00000456370 334 ntBASIC3.6□□□□□ -1.83
PROM1O43490 RPL21P41-201ENST00000459863 264 ntBASIC3.6□□□□□ -1.83
PROM1O43490 AL049830.2-201ENST00000480072 201 ntBASIC3.6□□□□□ -1.83
PROM1O43490 AC079140.5-201ENST00000507882 310 ntBASIC3.6□□□□□ -1.83
PROM1O43490 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.6□□□□□ -1.83
PROM1O43490 SNORA31.3-201ENST00000516029 96 ntBASIC3.6□□□□□ -1.83
PROM1O43490 SCARNA13-201ENST00000516672 275 ntBASIC3.6□□□□□ -1.83
PROM1O43490 RNU6-1016P-201ENST00000516689 94 ntBASIC3.6□□□□□ -1.83
PROM1O43490 SCARNA14-201ENST00000516903 136 ntBASIC3.6□□□□□ -1.83
PROM1O43490 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.6□□□□□ -1.83
PROM1O43490 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.6□□□□□ -1.83
PROM1O43490 AC022695.1-201ENST00000522089 237 ntBASIC3.6□□□□□ -1.83
PROM1O43490 CYCSP27-201ENST00000527643 293 ntBASIC3.6□□□□□ -1.83
PROM1O43490 SNRPGP16-201ENST00000533275 226 ntBASIC3.6□□□□□ -1.83
PROM1O43490 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.6□□□□□ -1.83
PROM1O43490 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.6□□□□□ -1.83
PROM1O43490 MTCO3P23-201ENST00000561363 289 ntBASIC3.6□□□□□ -1.83
PROM1O43490 MIR5692A1-201ENST00000580523 69 ntBASIC3.6□□□□□ -1.83
PROM1O43490 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.6□□□□□ -1.83
PROM1O43490 uc_338.22-201ENST00000622722 187 ntBASIC3.6□□□□□ -1.83
PROM1O43490 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.6□□□□□ -1.83
PROM1O43490 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.6□□□□□ -1.83
PROM1O43490 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PROM1O43490 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
PROM1O43490 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PROM1O43490 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
PROM1O43490 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.59□□□□□ -1.83
PROM1O43490 KPNA2P1-201ENST00000458289 1591 ntBASIC3.59□□□□□ -1.83
PROM1O43490 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PROM1O43490 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
PROM1O43490 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PROM1O43490 OR4G2P-202ENST00000641004 1759 ntBASIC3.59□□□□□ -1.83
PROM1O43490 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.59□□□□□ -1.83
PROM1O43490 RNA5SP119-201ENST00000362715 117 ntBASIC3.59□□□□□ -1.83
PROM1O43490 RNA5SP124-201ENST00000362739 110 ntBASIC3.59□□□□□ -1.83
PROM1O43490 RNU6-1303P-201ENST00000364841 107 ntBASIC3.59□□□□□ -1.83
PROM1O43490 SNORA73.2-201ENST00000364946 201 ntBASIC3.59□□□□□ -1.83
PROM1O43490 RNU6-214P-201ENST00000384130 107 ntBASIC3.59□□□□□ -1.83
PROM1O43490 Y_RNA.459-201ENST00000384251 102 ntBASIC3.59□□□□□ -1.83
PROM1O43490 MIR30B-201ENST00000384850 88 ntBASIC3.59□□□□□ -1.83
PROM1O43490 MIR483-201ENST00000385070 76 ntBASIC3.59□□□□□ -1.83
PROM1O43490 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PROM1O43490 SNORA11.2-201ENST00000408318 127 ntBASIC3.59□□□□□ -1.83
PROM1O43490 Y_RNA.646-201ENST00000410980 101 ntBASIC3.59□□□□□ -1.83
PROM1O43490 RAB9AP3-201ENST00000412737 573 ntBASIC3.59□□□□□ -1.83
PROM1O43490 AC091390.3-201ENST00000426478 338 ntBASIC3.59□□□□□ -1.83
PROM1O43490 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.59□□□□□ -1.83
PROM1O43490 RAB9AP1-201ENST00000449393 573 ntBASIC3.59□□□□□ -1.83
PROM1O43490 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.59□□□□□ -1.83
PROM1O43490 RPL23AP31-201ENST00000456160 467 ntBASIC3.59□□□□□ -1.83
PROM1O43490 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.59□□□□□ -1.83
PROM1O43490 RPS15AP34-201ENST00000487776 387 ntBASIC3.59□□□□□ -1.83
PROM1O43490 TRBV12-2-201ENST00000489763 344 ntBASIC3.59□□□□□ -1.83
PROM1O43490 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.59□□□□□ -1.83
PROM1O43490 AC116337.1-201ENST00000509680 687 ntBASIC3.59□□□□□ -1.83
PROM1O43490 RAC1P2-201ENST00000511164 579 ntBASIC3.59□□□□□ -1.83
PROM1O43490 SMURF2P1-201ENST00000514992 481 ntBASIC3.59□□□□□ -1.83
PROM1O43490 RNU6-914P-201ENST00000516749 109 ntBASIC3.59□□□□□ -1.83
PROM1O43490 RNU6-988P-201ENST00000519081 107 ntBASIC3.59□□□□□ -1.83
PROM1O43490 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.59□□□□□ -1.83
PROM1O43490 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.59□□□□□ -1.83
PROM1O43490 AC026371.1-201ENST00000551867 419 ntBASIC3.59□□□□□ -1.83
PROM1O43490 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.59□□□□□ -1.83
PROM1O43490 AC002545.1-201ENST00000592511 181 ntBASIC3.59□□□□□ -1.83
PROM1O43490 SNORA62.6-201ENST00000606322 83 ntBASIC3.59□□□□□ -1.83
PROM1O43490 AC002044.1-201ENST00000606707 158 ntBASIC3.59□□□□□ -1.83
PROM1O43490 AL121772.2-201ENST00000614331 297 ntBASIC3.59□□□□□ -1.83
PROM1O43490 MIR8058-201ENST00000615737 89 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms