Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC025755.1-201ENST00000521306 278 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.79□□□□□ -1.8
PRPF3O43395 MTCO3P24-201ENST00000572729 782 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 LRRC37A5P-203ENST00000580181 585 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.79□□□□□ -1.8
PRPF3O43395 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.79□□□□□ -1.8
PRPF3O43395 AC024614.3-201ENST00000637860 256 ntBASIC3.79□□□□□ -1.8
PRPF3O43395 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF3O43395 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF3O43395 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.79□□□□□ -1.8
PRPF3O43395 AC093536.2-201ENST00000565257 1406 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
PRPF3O43395 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.78□□□□□ -1.8
PRPF3O43395 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.78□□□□□ -1.8
PRPF3O43395 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PRPF3O43395 GABRG2-229ENST00000641017 3628 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 AC121333.1-201ENST00000567488 2709 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 RNU1-75P-201ENST00000347264 129 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 RNU1-105P-201ENST00000363470 161 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 RNA5SP267-201ENST00000364893 126 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PRPF3O43395 RNU6-38P-201ENST00000384085 107 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.78□□□□□ -1.8
PRPF3O43395 AL139039.1-201ENST00000401900 692 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 RPL5P18-201ENST00000406671 891 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 RPL21P90-201ENST00000415692 466 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.78□□□□□ -1.8
PRPF3O43395 RPS15AP6-201ENST00000420703 385 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.78□□□□□ -1.8
PRPF3O43395 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.78□□□□□ -1.8
PRPF3O43395 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.78□□□□□ -1.8
PRPF3O43395 AC005300.1-201ENST00000428401 373 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.78□□□□□ -1.8
PRPF3O43395 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.78□□□□□ -1.8
PRPF3O43395 RNU6-333P-201ENST00000459117 107 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PRPF3O43395 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.78□□□□□ -1.8
PRPF3O43395 AC112206.3-201ENST00000514578 389 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 RNU6-572P-201ENST00000516724 80 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 SNORA31.19-201ENST00000517079 126 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 AC069113.1-201ENST00000517763 267 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.78□□□□□ -1.8
PRPF3O43395 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.78□□□□□ -1.8
PRPF3O43395 CENPUP1-201ENST00000526649 1202 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 CYCSP27-201ENST00000527643 293 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.78□□□□□ -1.8
PRPF3O43395 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.78□□□□□ -1.8
PRPF3O43395 AC073657.2-201ENST00000605661 303 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 AC069200.1-201ENST00000609511 323 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 RMST_3.1-201ENST00000611651 109 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 U6.99-201ENST00000637524 83 ntBASIC3.78□□□□□ -1.8
PRPF3O43395 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PRPF3O43395 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.81
PRPF3O43395 MAPK10-362ENST00000641864 4484 ntBASIC3.78□□□□□ -1.81
PRPF3O43395 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PRPF3O43395 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PRPF3O43395 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PRPF3O43395 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PRPF3O43395 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PRPF3O43395 RNU6-1179P-201ENST00000384667 107 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PRPF3O43395 RAP1BP3-201ENST00000407180 549 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 RNU4-26P-201ENST00000410270 107 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 Y_RNA.623-201ENST00000411128 95 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 RNU6-607P-201ENST00000411283 108 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 HSPE1P1-201ENST00000421494 318 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 AL669831.1-202ENST00000428504 417 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.77□□□□□ -1.81
PRPF3O43395 CST9LP2-201ENST00000437612 320 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 GTF2IP13-201ENST00000438487 386 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 RPS3AP12-201ENST00000443616 753 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 AL360271.2-201ENST00000447710 161 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 AC006026.2-201ENST00000457376 180 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 HMGN1P18-201ENST00000457642 277 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 RPL21P99-201ENST00000480369 423 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.77□□□□□ -1.81
PRPF3O43395 AC022493.1-201ENST00000492984 337 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.77□□□□□ -1.81
PRPF3O43395 RNU2-69P-201ENST00000516061 100 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 RNU6-358P-201ENST00000516564 75 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 AC134698.4-201ENST00000523451 826 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 TRAV37-201ENST00000553906 342 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 AC087045.1-201ENST00000605856 382 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PRPF3O43395 MIR8058-201ENST00000615737 89 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 AC012314.7-201ENST00000619693 93 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 AC073476.4-201ENST00000628409 72 ntBASIC3.77□□□□□ -1.81
PRPF3O43395 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PRPF3O43395 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PRPF3O43395 AC093908.1-201ENST00000623125 8092 ntBASIC3.76□□□□□ -1.81
PRPF3O43395 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF3O43395 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF3O43395 FGF7P8-201ENST00000402994 292 ntBASIC3.76□□□□□ -1.81
PRPF3O43395 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.76□□□□□ -1.81
PRPF3O43395 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.76□□□□□ -1.81
PRPF3O43395 AL139413.1-201ENST00000421309 217 ntBASIC3.76□□□□□ -1.81
PRPF3O43395 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms