Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RNA5SP171-201ENST00000391071 115 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 AC110754.1-201ENST00000399740 601 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 RNA5SP56-201ENST00000410277 118 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 RN7SKP177-201ENST00000410567 355 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.39□□□□□ -1.71
SRGAP3O43295 AC006989.1-201ENST00000427212 131 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 AC097713.2-201ENST00000430199 356 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 AL591704.1-201ENST00000432574 275 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.39□□□□□ -1.71
SRGAP3O43295 SNORD5.1-201ENST00000458800 75 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 U3.44-201ENST00000458938 192 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 AC010655.3-201ENST00000478818 450 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 AC104564.1-201ENST00000493028 407 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 Y_RNA.721-201ENST00000517207 102 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.39□□□□□ -1.71
SRGAP3O43295 AC067852.3-201ENST00000589177 561 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.39□□□□□ -1.71
SRGAP3O43295 U2.1-201ENST00000618978 145 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 MIR6130-201ENST00000619419 109 ntBASIC4.39□□□□□ -1.71
SRGAP3O43295 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SRGAP3O43295 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SRGAP3O43295 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SRGAP3O43295 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SRGAP3O43295 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SRGAP3O43295 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
SRGAP3O43295 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRGAP3O43295 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRGAP3O43295 AC138393.1-203ENST00000327086 343 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 RNU6-288P-201ENST00000363690 104 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 Y_RNA.485-201ENST00000384395 102 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 Y_RNA.556-201ENST00000384677 113 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.38□□□□□ -1.71
SRGAP3O43295 AC243428.1-201ENST00000421099 264 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.38□□□□□ -1.71
SRGAP3O43295 AC004866.2-201ENST00000438285 481 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SRGAP3O43295 EIF4A1P11-201ENST00000451239 222 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 RN7SL594P-201ENST00000470590 287 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 AP000926.1-201ENST00000479573 241 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 AC009901.1-201ENST00000506703 541 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 AC110768.1-201ENST00000509222 400 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 RN7SKP60-201ENST00000516985 239 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 RNU6-388P-201ENST00000517012 105 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 RNU6-389P-201ENST00000517048 105 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRGAP3O43295 AP006245.1-201ENST00000522549 120 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 AC107918.3-201ENST00000533272 382 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.38□□□□□ -1.71
SRGAP3O43295 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.38□□□□□ -1.71
SRGAP3O43295 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.38□□□□□ -1.71
SRGAP3O43295 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.38□□□□□ -1.71
SRGAP3O43295 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.38□□□□□ -1.71
SRGAP3O43295 AC104763.2-201ENST00000604179 382 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SRGAP3O43295 AC002044.1-201ENST00000606707 158 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 U3.45-201ENST00000607547 219 ntBASIC4.38□□□□□ -1.71
SRGAP3O43295 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.38□□□□□ -1.71
SRGAP3O43295 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SRGAP3O43295 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SRGAP3O43295 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRGAP3O43295 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SRGAP3O43295 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRGAP3O43295 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRGAP3O43295 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SRGAP3O43295 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
SRGAP3O43295 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SRGAP3O43295 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SRGAP3O43295 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SRGAP3O43295 RNA5SP119-201ENST00000362715 117 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 RNU6-379P-201ENST00000363813 104 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 RNU6-266P-201ENST00000364225 107 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 RNU6-1303P-201ENST00000364841 107 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 Y_RNA.307-201ENST00000365022 117 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SRGAP3O43295 RNU6-45P-201ENST00000384471 107 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 AC096664.2-201ENST00000411843 406 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 SSXP9-201ENST00000417503 292 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.37□□□□□ -1.71
SRGAP3O43295 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.37□□□□□ -1.71
SRGAP3O43295 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.37□□□□□ -1.71
SRGAP3O43295 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.37□□□□□ -1.71
SRGAP3O43295 PCNPP5-201ENST00000452246 481 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 RBMY2UP-201ENST00000453474 324 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 AC025518.1-201ENST00000479856 347 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 AP005902.1-201ENST00000521358 186 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 AC022790.1-201ENST00000522872 204 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 HSBP1P1-201ENST00000555205 166 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.37□□□□□ -1.71
SRGAP3O43295 MIR4512-201ENST00000583257 77 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 AC012119.1-201ENST00000603184 222 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 AC174048.1-201ENST00000603389 144 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 MIR92B-201ENST00000607575 96 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 MIR7851-201ENST00000610611 160 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 AL450472.3-201ENST00000615578 367 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.37□□□□□ -1.71
SRGAP3O43295 AC244205.2-202ENST00000635781 342 ntBASIC4.37□□□□□ -1.71
SRGAP3O43295 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SRGAP3O43295 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
SRGAP3O43295 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms