Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.86□□□□□ -1.95
TO15178 HMGB1P33-201ENST00000563485 527 ntBASIC2.86□□□□□ -1.95
TO15178 AC008752.3-201ENST00000588113 712 ntBASIC2.86□□□□□ -1.95
TO15178 AC012493.2-201ENST00000595083 291 ntBASIC2.86□□□□□ -1.95
TO15178 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.86□□□□□ -1.95
TO15178 U4.5-201ENST00000617137 123 ntBASIC2.86□□□□□ -1.95
TO15178 AL354950.2-201ENST00000617939 290 ntBASIC2.86□□□□□ -1.95
TO15178 UCA1.1-201ENST00000620952 75 ntBASIC2.86□□□□□ -1.95
TO15178 MIR8057-201ENST00000620957 69 ntBASIC2.86□□□□□ -1.95
TO15178 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
TO15178 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
TO15178 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TO15178 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.85□□□□□ -1.95
TO15178 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TO15178 NACAP2-201ENST00000318548 624 ntBASIC2.85□□□□□ -1.95
TO15178 RNU6-778P-201ENST00000363269 103 ntBASIC2.85□□□□□ -1.95
TO15178 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.85□□□□□ -1.95
TO15178 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.85□□□□□ -1.95
TO15178 RNU1-73P-201ENST00000383971 164 ntBASIC2.85□□□□□ -1.95
TO15178 RNU6-517P-201ENST00000384362 110 ntBASIC2.85□□□□□ -1.95
TO15178 RNU6-550P-201ENST00000391057 101 ntBASIC2.85□□□□□ -1.95
TO15178 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.85□□□□□ -1.95
TO15178 AL590002.1-201ENST00000406554 418 ntBASIC2.85□□□□□ -1.95
TO15178 RNU6-1025P-201ENST00000410629 104 ntBASIC2.85□□□□□ -1.95
TO15178 RNU4-46P-201ENST00000410818 138 ntBASIC2.85□□□□□ -1.95
TO15178 RNA5SP492-201ENST00000411330 114 ntBASIC2.85□□□□□ -1.95
TO15178 RPL19P1-201ENST00000411635 428 ntBASIC2.85□□□□□ -1.95
TO15178 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.85□□□□□ -1.95
TO15178 AL139281.1-201ENST00000422120 335 ntBASIC2.85□□□□□ -1.95
TO15178 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.85□□□□□ -1.95
TO15178 AC006946.1-201ENST00000429106 328 ntBASIC2.85□□□□□ -1.95
TO15178 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.85□□□□□ -1.95
TO15178 AL606489.2-201ENST00000433886 234 ntBASIC2.85□□□□□ -1.95
TO15178 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.85□□□□□ -1.95
TO15178 BRK1P2-201ENST00000442875 223 ntBASIC2.85□□□□□ -1.95
TO15178 snoU13.22-201ENST00000459428 104 ntBASIC2.85□□□□□ -1.95
TO15178 AC083798.1-201ENST00000472671 131 ntBASIC2.85□□□□□ -1.95
TO15178 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
TO15178 AC006445.1-201ENST00000491925 405 ntBASIC2.85□□□□□ -1.95
TO15178 AC026801.1-201ENST00000497178 464 ntBASIC2.85□□□□□ -1.95
TO15178 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.85□□□□□ -1.95
TO15178 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
TO15178 AC114786.4-201ENST00000508771 728 ntBASIC2.85□□□□□ -1.95
TO15178 Y_RNA.693-201ENST00000516641 110 ntBASIC2.85□□□□□ -1.95
TO15178 RN7SKP219-201ENST00000516825 296 ntBASIC2.85□□□□□ -1.95
TO15178 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.85□□□□□ -1.95
TO15178 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.85□□□□□ -1.95
TO15178 PSMA2P1-201ENST00000526365 646 ntBASIC2.85□□□□□ -1.95
TO15178 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.85□□□□□ -1.95
TO15178 AC027807.1-201ENST00000559921 996 ntBASIC2.85□□□□□ -1.95
TO15178 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.85□□□□□ -1.95
TO15178 MTATP6P3-201ENST00000581686 676 ntBASIC2.85□□□□□ -1.95
TO15178 MIR548AC-201ENST00000585049 88 ntBASIC2.85□□□□□ -1.95
TO15178 MTND4LP5-201ENST00000605152 292 ntBASIC2.85□□□□□ -1.95
TO15178 AL021997.1-201ENST00000605757 193 ntBASIC2.85□□□□□ -1.95
TO15178 AP001596.2-201ENST00000608410 312 ntBASIC2.85□□□□□ -1.95
TO15178 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.85□□□□□ -1.95
TO15178 AC092954.2-201ENST00000609103 430 ntBASIC2.85□□□□□ -1.95
TO15178 AL442067.2-201ENST00000614033 363 ntBASIC2.85□□□□□ -1.95
TO15178 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.85□□□□□ -1.95
TO15178 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TO15178 CKAP2P1-201ENST00000555477 2049 ntBASIC2.85□□□□□ -1.95
TO15178 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.85□□□□□ -1.95
TO15178 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.85□□□□□ -1.95
TO15178 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
TO15178 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TO15178 AL139276.1-201ENST00000311910 1001 ntBASIC2.84□□□□□ -1.95
TO15178 U3.6-201ENST00000363622 211 ntBASIC2.84□□□□□ -1.95
TO15178 SNORA70.4-201ENST00000365509 134 ntBASIC2.84□□□□□ -1.95
TO15178 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.84□□□□□ -1.95
TO15178 MIR627-201ENST00000384979 97 ntBASIC2.84□□□□□ -1.95
TO15178 UBE2V1P2-201ENST00000397758 440 ntBASIC2.84□□□□□ -1.95
TO15178 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TO15178 CYCSP32-201ENST00000440548 321 ntBASIC2.84□□□□□ -1.95
TO15178 FDX1P2-201ENST00000450769 375 ntBASIC2.84□□□□□ -1.95
TO15178 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.84□□□□□ -1.95
TO15178 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.84□□□□□ -1.95
TO15178 RNU6-261P-201ENST00000459506 102 ntBASIC2.84□□□□□ -1.95
TO15178 AC128713.1-201ENST00000471495 306 ntBASIC2.84□□□□□ -1.95
TO15178 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.84□□□□□ -1.95
TO15178 AL163973.1-201ENST00000484753 577 ntBASIC2.84□□□□□ -1.95
TO15178 RPL36AP51-201ENST00000487216 318 ntBASIC2.84□□□□□ -1.95
TO15178 AC092436.1-201ENST00000506450 503 ntBASIC2.84□□□□□ -1.95
TO15178 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.84□□□□□ -1.95
TO15178 SNORA40.12-201ENST00000516329 111 ntBASIC2.84□□□□□ -1.95
TO15178 RNU6-703P-201ENST00000516946 107 ntBASIC2.84□□□□□ -1.95
TO15178 AC025755.1-201ENST00000521306 278 ntBASIC2.84□□□□□ -1.95
TO15178 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.84□□□□□ -1.95
TO15178 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.84□□□□□ -1.95
TO15178 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.84□□□□□ -1.95
TO15178 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.84□□□□□ -1.95
TO15178 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.84□□□□□ -1.95
TO15178 TPRKBP2-201ENST00000565969 475 ntBASIC2.84□□□□□ -1.95
TO15178 AC025678.1-201ENST00000567861 338 ntBASIC2.84□□□□□ -1.95
TO15178 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.84□□□□□ -1.95
TO15178 MIR5692A1-201ENST00000580523 69 ntBASIC2.84□□□□□ -1.95
TO15178 AC007621.1-201ENST00000604544 437 ntBASIC2.84□□□□□ -1.95
TO15178 AL627309.6-201ENST00000606857 840 ntBASIC2.84□□□□□ -1.95
TO15178 MTND4P14-201ENST00000435799 1354 ntBASIC2.84□□□□□ -1.96
TO15178 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms