Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC127459.3-201ENST00000624328 466 ntBASIC4.62□□□□□ -1.67
SOX1O00570 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.62□□□□□ -1.67
SOX1O00570 U6.92-201ENST00000636464 89 ntBASIC4.62□□□□□ -1.67
SOX1O00570 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SOX1O00570 MARK2P15-201ENST00000432204 2186 ntBASIC4.62□□□□□ -1.67
SOX1O00570 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SOX1O00570 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SOX1O00570 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SOX1O00570 AL450326.2-201ENST00000421913 1962 ntBASIC4.62□□□□□ -1.67
SOX1O00570 AL365440.1-201ENST00000436135 2167 ntBASIC4.61□□□□□ -1.67
SOX1O00570 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.61□□□□□ -1.67
SOX1O00570 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX1O00570 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX1O00570 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX1O00570 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
SOX1O00570 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SOX1O00570 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX1O00570 DEFB108F-201ENST00000344638 222 ntBASIC4.61□□□□□ -1.67
SOX1O00570 RNU6-1266P-201ENST00000362794 105 ntBASIC4.61□□□□□ -1.67
SOX1O00570 Y_RNA.143-201ENST00000363520 106 ntBASIC4.61□□□□□ -1.67
SOX1O00570 U3.6-201ENST00000363622 211 ntBASIC4.61□□□□□ -1.67
SOX1O00570 RNU6-173P-201ENST00000364215 104 ntBASIC4.61□□□□□ -1.67
SOX1O00570 MTCO2P33-201ENST00000402100 465 ntBASIC4.61□□□□□ -1.67
SOX1O00570 AL080315.1-201ENST00000406055 466 ntBASIC4.61□□□□□ -1.67
SOX1O00570 MIR1298-201ENST00000408783 112 ntBASIC4.61□□□□□ -1.67
SOX1O00570 MIR1289-1-201ENST00000408836 144 ntBASIC4.61□□□□□ -1.67
SOX1O00570 SNORA57.3-201ENST00000411095 141 ntBASIC4.61□□□□□ -1.67
SOX1O00570 Y_RNA.623-201ENST00000411128 95 ntBASIC4.61□□□□□ -1.67
SOX1O00570 Y_RNA.793-201ENST00000411222 111 ntBASIC4.61□□□□□ -1.67
SOX1O00570 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.61□□□□□ -1.67
SOX1O00570 AL591043.1-201ENST00000432461 424 ntBASIC4.61□□□□□ -1.67
SOX1O00570 AL445305.1-201ENST00000432577 575 ntBASIC4.61□□□□□ -1.67
SOX1O00570 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.61□□□□□ -1.67
SOX1O00570 AC104164.2-201ENST00000496953 495 ntBASIC4.61□□□□□ -1.67
SOX1O00570 RNU7-175P-201ENST00000515915 61 ntBASIC4.61□□□□□ -1.67
SOX1O00570 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SOX1O00570 AL359219.2-201ENST00000555184 348 ntBASIC4.61□□□□□ -1.67
SOX1O00570 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.61□□□□□ -1.67
SOX1O00570 MIR3922-201ENST00000585192 84 ntBASIC4.61□□□□□ -1.67
SOX1O00570 AC008121.1-201ENST00000603244 268 ntBASIC4.61□□□□□ -1.67
SOX1O00570 AL139395.1-201ENST00000603662 160 ntBASIC4.61□□□□□ -1.67
SOX1O00570 AL645944.1-201ENST00000603857 493 ntBASIC4.61□□□□□ -1.67
SOX1O00570 AL137843.1-201ENST00000605078 385 ntBASIC4.61□□□□□ -1.67
SOX1O00570 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.61□□□□□ -1.67
SOX1O00570 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.61□□□□□ -1.67
SOX1O00570 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.61□□□□□ -1.67
SOX1O00570 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.61□□□□□ -1.67
SOX1O00570 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SOX1O00570 AL161629.2-201ENST00000615347 275 ntBASIC4.61□□□□□ -1.67
SOX1O00570 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.61□□□□□ -1.67
SOX1O00570 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.61□□□□□ -1.67
SOX1O00570 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX1O00570 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SOX1O00570 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SOX1O00570 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX1O00570 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX1O00570 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SOX1O00570 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX1O00570 AC116096.1-201ENST00000566804 2314 ntBASIC4.61□□□□□ -1.67
SOX1O00570 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.61□□□□□ -1.67
SOX1O00570 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SOX1O00570 OR4G2P-202ENST00000641004 1759 ntBASIC4.6□□□□□ -1.67
SOX1O00570 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SOX1O00570 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.6□□□□□ -1.67
SOX1O00570 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SOX1O00570 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SOX1O00570 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SOX1O00570 AC092376.2-201ENST00000622621 4116 ntBASIC4.6□□□□□ -1.67
SOX1O00570 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.6□□□□□ -1.67
SOX1O00570 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SOX1O00570 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SOX1O00570 RNU6-545P-201ENST00000362681 104 ntBASIC4.6□□□□□ -1.67
SOX1O00570 Y_RNA.83-201ENST00000363005 113 ntBASIC4.6□□□□□ -1.67
SOX1O00570 SNORD14B-201ENST00000364533 90 ntBASIC4.6□□□□□ -1.67
SOX1O00570 Y_RNA.405-201ENST00000383979 100 ntBASIC4.6□□□□□ -1.67
SOX1O00570 RNU6-213P-201ENST00000384051 104 ntBASIC4.6□□□□□ -1.67
SOX1O00570 Y_RNA.451-201ENST00000384200 100 ntBASIC4.6□□□□□ -1.67
SOX1O00570 Y_RNA.524-201ENST00000384564 100 ntBASIC4.6□□□□□ -1.67
SOX1O00570 Y_RNA.561-201ENST00000384694 100 ntBASIC4.6□□□□□ -1.67
SOX1O00570 RN7SKP284-201ENST00000411002 343 ntBASIC4.6□□□□□ -1.67
SOX1O00570 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.6□□□□□ -1.67
SOX1O00570 RPS29P4-201ENST00000414733 161 ntBASIC4.6□□□□□ -1.67
SOX1O00570 OR2AH1P-201ENST00000425717 928 ntBASIC4.6□□□□□ -1.67
SOX1O00570 AL358472.1-201ENST00000431295 329 ntBASIC4.6□□□□□ -1.67
SOX1O00570 MTCO3P29-201ENST00000432119 779 ntBASIC4.6□□□□□ -1.67
SOX1O00570 BX679664.1-201ENST00000434429 253 ntBASIC4.6□□□□□ -1.67
SOX1O00570 AC013470.1-201ENST00000453438 462 ntBASIC4.6□□□□□ -1.67
SOX1O00570 FABP5P15-201ENST00000453566 214 ntBASIC4.6□□□□□ -1.67
SOX1O00570 Y_RNA.644-201ENST00000459006 113 ntBASIC4.6□□□□□ -1.67
SOX1O00570 RNU7-87P-201ENST00000459343 62 ntBASIC4.6□□□□□ -1.67
SOX1O00570 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.6□□□□□ -1.67
SOX1O00570 Y_RNA.674-201ENST00000516362 113 ntBASIC4.6□□□□□ -1.67
SOX1O00570 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.6□□□□□ -1.67
SOX1O00570 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.6□□□□□ -1.67
SOX1O00570 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.6□□□□□ -1.67
SOX1O00570 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.6□□□□□ -1.67
SOX1O00570 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.6□□□□□ -1.67
SOX1O00570 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.6□□□□□ -1.67
SOX1O00570 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SOX1O00570 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms