Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.48□□□□□ -2.33
CACNA1AO00555 AC105036.1-201ENST00000566222 271 ntBASIC0.48□□□□□ -2.33
CACNA1AO00555 AC069304.3-201ENST00000603938 1084 ntBASIC0.48□□□□□ -2.33
CACNA1AO00555 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.48□□□□□ -2.33
CACNA1AO00555 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CACNA1AO00555 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CACNA1AO00555 MTCO1P56-201ENST00000401674 224 ntBASIC0.48□□□□□ -2.33
CACNA1AO00555 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CACNA1AO00555 RNU6-319P-201ENST00000516025 108 ntBASIC0.48□□□□□ -2.33
CACNA1AO00555 AC107954.1-201ENST00000565906 727 ntBASIC0.48□□□□□ -2.33
CACNA1AO00555 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.48□□□□□ -2.33
CACNA1AO00555 AL158211.1-201ENST00000566763 763 ntBASIC0.48□□□□□ -2.33
CACNA1AO00555 AC090616.5-202ENST00000582111 297 ntBASIC0.48□□□□□ -2.33
CACNA1AO00555 BNIP3P25-201ENST00000596023 559 ntBASIC0.48□□□□□ -2.33
CACNA1AO00555 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.48□□□□□ -2.33
CACNA1AO00555 SNORA16B-201ENST00000364674 135 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 AP002784.2-201ENST00000397300 549 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 RNU2-64P-201ENST00000411315 191 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 SFR1P2-201ENST00000421841 730 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 PTGES3P4-201ENST00000426243 356 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 AC023347.2-201ENST00000433994 462 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 RPL23AP3-201ENST00000453844 468 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 AC067940.1-201ENST00000458411 300 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.47□□□□□ -2.33
CACNA1AO00555 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.47□□□□□ -2.33
CACNA1AO00555 OR10V3P-201ENST00000525712 725 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 MIR3117-201ENST00000584034 78 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.47□□□□□ -2.33
CACNA1AO00555 AC004908.2-201ENST00000609090 574 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 AC003001.2-201ENST00000616294 831 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 MIR7515-201ENST00000637837 67 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.47□□□□□ -2.33
CACNA1AO00555 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.47□□□□□ -2.33
CACNA1AO00555 MIR126-201ENST00000362291 85 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 SNORA50A-201ENST00000384225 134 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 Y_RNA.476-201ENST00000384347 108 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 AL512844.2-201ENST00000433990 593 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.47□□□□□ -2.33
CACNA1AO00555 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.47□□□□□ -2.33
CACNA1AO00555 SNORD54-201ENST00000459159 67 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 RNU6-322P-201ENST00000516010 103 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 RNA5SP461-201ENST00000516451 104 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 AC022690.1-201ENST00000526681 550 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.47□□□□□ -2.33
CACNA1AO00555 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.47□□□□□ -2.33
CACNA1AO00555 MIR4645-201ENST00000583158 77 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 AL355810.1-201ENST00000614629 552 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 AL133370.2-201ENST00000619934 439 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 AP003485.1-201ENST00000625093 753 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.47□□□□□ -2.33
CACNA1AO00555 AP001350.1-201ENST00000601906 1524 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 MTND5P32-201ENST00000560711 1802 ntBASIC0.47□□□□□ -2.33
CACNA1AO00555 Y_RNA.498-201ENST00000384460 102 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 MIR607-201ENST00000385241 96 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 RNU4-65P-201ENST00000410473 140 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 RNA5SP222-201ENST00000411039 105 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.46□□□□□ -2.34
CACNA1AO00555 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CACNA1AO00555 snoU13.7-201ENST00000459220 104 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 SYPL1P1-201ENST00000473622 768 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 AL135752.1-201ENST00000479477 471 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.46□□□□□ -2.34
CACNA1AO00555 HMGB1P22-201ENST00000505315 124 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 AC103851.1-201ENST00000506833 274 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 AC104108.1-201ENST00000509930 412 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.46□□□□□ -2.34
CACNA1AO00555 RNU6-970P-201ENST00000516312 107 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.46□□□□□ -2.34
CACNA1AO00555 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.46□□□□□ -2.34
CACNA1AO00555 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.46□□□□□ -2.34
CACNA1AO00555 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.46□□□□□ -2.34
CACNA1AO00555 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.46□□□□□ -2.34
CACNA1AO00555 AC015726.3-201ENST00000624501 418 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.46□□□□□ -2.34
CACNA1AO00555 AC096656.1-201ENST00000623826 1364 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
CACNA1AO00555 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.46□□□□□ -2.34
CACNA1AO00555 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.46□□□□□ -2.34
CACNA1AO00555 RNF2P1-201ENST00000442955 1010 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 AL358794.1-201ENST00000445689 381 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.46□□□□□ -2.34
CACNA1AO00555 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.46□□□□□ -2.34
CACNA1AO00555 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.46□□□□□ -2.34
CACNA1AO00555 RNU6-928P-201ENST00000516876 104 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 RN7SKP277-201ENST00000516895 283 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.46□□□□□ -2.34
CACNA1AO00555 AC093027.1-201ENST00000546698 429 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.46□□□□□ -2.34
CACNA1AO00555 AL450336.1-201ENST00000605180 586 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.46□□□□□ -2.34
CACNA1AO00555 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 AC008555.8-201ENST00000623602 2168 ntBASIC0.46□□□□□ -2.34
CACNA1AO00555 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.46□□□□□ -2.34
CACNA1AO00555 RNU6-45P-201ENST00000384471 107 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 RNU6-1072P-201ENST00000384703 107 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 RNU6-443P-201ENST00000384780 107 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 MIR214-201ENST00000385214 110 ntBASIC0.45□□□□□ -2.34
CACNA1AO00555 MIR676-201ENST00000390702 67 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms