Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 MTND2P24-201ENST00000453434 806 ntBASIC0.63□□□□□ -2.31
HMGN4O00479 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.63□□□□□ -2.31
HMGN4O00479 MTCO3P2-201ENST00000457365 171 ntBASIC0.63□□□□□ -2.31
HMGN4O00479 snoU13.9-201ENST00000458927 103 ntBASIC0.63□□□□□ -2.31
HMGN4O00479 AC117454.1-201ENST00000491120 168 ntBASIC0.63□□□□□ -2.31
HMGN4O00479 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.63□□□□□ -2.31
HMGN4O00479 AP003122.4-201ENST00000530980 758 ntBASIC0.63□□□□□ -2.31
HMGN4O00479 AC011604.1-201ENST00000545978 196 ntBASIC0.63□□□□□ -2.31
HMGN4O00479 AC005261.5-201ENST00000596280 355 ntBASIC0.63□□□□□ -2.31
HMGN4O00479 AL355802.3-201ENST00000607571 545 ntBASIC0.63□□□□□ -2.31
HMGN4O00479 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.63□□□□□ -2.31
HMGN4O00479 RBBP8P1-201ENST00000449447 1844 ntBASIC0.63□□□□□ -2.31
HMGN4O00479 GDI2P1-201ENST00000429312 1336 ntBASIC0.63□□□□□ -2.31
HMGN4O00479 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.63□□□□□ -2.31
HMGN4O00479 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
HMGN4O00479 RNU6-271P-201ENST00000363858 105 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 RNU2-33P-201ENST00000410344 192 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 RNA5SP501-201ENST00000410990 112 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 NDUFS5P4-201ENST00000412983 318 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.62□□□□□ -2.31
HMGN4O00479 MTCO2P20-201ENST00000437339 673 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.62□□□□□ -2.31
HMGN4O00479 KATNBL1P6-201ENST00000453433 915 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 AC244505.3-201ENST00000454598 187 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 AL121594.1-201ENST00000475906 575 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 RPL30P7-201ENST00000479312 323 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 RPL22P13-201ENST00000493291 347 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.62□□□□□ -2.31
HMGN4O00479 AC104997.1-201ENST00000519761 717 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 DEFB108E-201ENST00000524692 240 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.62□□□□□ -2.31
HMGN4O00479 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.62□□□□□ -2.31
HMGN4O00479 CYB5AP5-201ENST00000549779 389 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 AC044913.1-201ENST00000557200 430 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 AC021739.1-201ENST00000559631 174 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.62□□□□□ -2.31
HMGN4O00479 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.62□□□□□ -2.31
HMGN4O00479 NIFKP6-201ENST00000598115 845 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 AL121890.5-201ENST00000620848 304 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 MIR6835-201ENST00000621552 64 ntBASIC0.62□□□□□ -2.31
HMGN4O00479 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
HMGN4O00479 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.61□□□□□ -2.31
HMGN4O00479 MTND5P35-201ENST00000557537 1720 ntBASIC0.61□□□□□ -2.31
HMGN4O00479 RNU6-439P-201ENST00000384188 106 ntBASIC0.61□□□□□ -2.31
HMGN4O00479 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGN4O00479 AC092634.2-201ENST00000428146 1010 ntBASIC0.61□□□□□ -2.31
HMGN4O00479 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGN4O00479 AC108059.3-201ENST00000456388 214 ntBASIC0.61□□□□□ -2.31
HMGN4O00479 AC006512.1-201ENST00000468816 291 ntBASIC0.61□□□□□ -2.31
HMGN4O00479 AL133373.1-201ENST00000497098 94 ntBASIC0.61□□□□□ -2.31
HMGN4O00479 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC0.61□□□□□ -2.31
HMGN4O00479 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGN4O00479 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.61□□□□□ -2.31
HMGN4O00479 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGN4O00479 NACAP3-201ENST00000552100 481 ntBASIC0.61□□□□□ -2.31
HMGN4O00479 AL132857.1-201ENST00000555180 708 ntBASIC0.61□□□□□ -2.31
HMGN4O00479 AC233266.2-201ENST00000567067 528 ntBASIC0.61□□□□□ -2.31
HMGN4O00479 AC091152.3-201ENST00000604227 325 ntBASIC0.61□□□□□ -2.31
HMGN4O00479 BNIP3P10-201ENST00000605360 577 ntBASIC0.61□□□□□ -2.31
HMGN4O00479 AC092953.2-201ENST00000608000 699 ntBASIC0.61□□□□□ -2.31
HMGN4O00479 AC090517.3-201ENST00000625170 141 ntBASIC0.61□□□□□ -2.31
HMGN4O00479 MTND1P37-201ENST00000636562 264 ntBASIC0.61□□□□□ -2.31
HMGN4O00479 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
HMGN4O00479 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.61□□□□□ -2.31
HMGN4O00479 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.61□□□□□ -2.31
HMGN4O00479 Z75746.1-201ENST00000440243 2080 ntBASIC0.6□□□□□ -2.31
HMGN4O00479 SNORD115-3-201ENST00000363100 82 ntBASIC0.6□□□□□ -2.31
HMGN4O00479 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.6□□□□□ -2.31
HMGN4O00479 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.6□□□□□ -2.31
HMGN4O00479 AC007919.1-201ENST00000429380 217 ntBASIC0.6□□□□□ -2.31
HMGN4O00479 AP001324.2-201ENST00000461163 319 ntBASIC0.6□□□□□ -2.31
HMGN4O00479 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.6□□□□□ -2.31
HMGN4O00479 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.6□□□□□ -2.31
HMGN4O00479 SNORA48.9-201ENST00000516419 162 ntBASIC0.6□□□□□ -2.31
HMGN4O00479 AP003066.2-201ENST00000529375 555 ntBASIC0.6□□□□□ -2.31
HMGN4O00479 AC124293.1-201ENST00000530034 493 ntBASIC0.6□□□□□ -2.31
HMGN4O00479 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.6□□□□□ -2.31
HMGN4O00479 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.6□□□□□ -2.31
HMGN4O00479 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.6□□□□□ -2.31
HMGN4O00479 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.6□□□□□ -2.31
HMGN4O00479 BNIP3P23-201ENST00000599655 511 ntBASIC0.6□□□□□ -2.31
HMGN4O00479 AL391516.1-201ENST00000554380 2449 ntBASIC0.6□□□□□ -2.31
HMGN4O00479 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.6□□□□□ -2.31
HMGN4O00479 AC009541.1-201ENST00000438279 2662 ntBASIC0.59□□□□□ -2.31
HMGN4O00479 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
HMGN4O00479 SNORA51.6-201ENST00000384151 125 ntBASIC0.59□□□□□ -2.31
HMGN4O00479 RNU11-3P-201ENST00000391111 133 ntBASIC0.59□□□□□ -2.31
HMGN4O00479 AL591034.2-201ENST00000402839 359 ntBASIC0.59□□□□□ -2.31
HMGN4O00479 USP9YP19-201ENST00000412165 485 ntBASIC0.59□□□□□ -2.31
HMGN4O00479 USP9YP13-201ENST00000417797 480 ntBASIC0.59□□□□□ -2.31
HMGN4O00479 AL135790.2-201ENST00000437701 267 ntBASIC0.59□□□□□ -2.31
HMGN4O00479 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.59□□□□□ -2.31
HMGN4O00479 PRPS1P1-201ENST00000445305 876 ntBASIC0.59□□□□□ -2.31
HMGN4O00479 RPS4XP11-201ENST00000446897 772 ntBASIC0.59□□□□□ -2.31
HMGN4O00479 RPS26P55-201ENST00000471178 356 ntBASIC0.59□□□□□ -2.31
HMGN4O00479 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.59□□□□□ -2.31
HMGN4O00479 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.59□□□□□ -2.31
HMGN4O00479 BOLA3P3-201ENST00000505182 232 ntBASIC0.59□□□□□ -2.31
HMGN4O00479 UBL5P1-201ENST00000507979 193 ntBASIC0.59□□□□□ -2.31
HMGN4O00479 RNU7-40P-201ENST00000516397 64 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms