Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 XKRYP2-201ENST00000432915 492 ntBASIC2.58□□□□□ -2
DDX39AO00148 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.58□□□□□ -2
DDX39AO00148 AC004383.1-201ENST00000438135 289 ntBASIC2.58□□□□□ -2
DDX39AO00148 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.58□□□□□ -2
DDX39AO00148 AL590365.1-201ENST00000450788 243 ntBASIC2.58□□□□□ -2
DDX39AO00148 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.58□□□□□ -2
DDX39AO00148 AC109927.2-201ENST00000506416 303 ntBASIC2.58□□□□□ -2
DDX39AO00148 AC116655.1-201ENST00000508324 901 ntBASIC2.58□□□□□ -2
DDX39AO00148 ACA59.2-201ENST00000517061 156 ntBASIC2.58□□□□□ -2
DDX39AO00148 AC025881.1-201ENST00000518851 512 ntBASIC2.58□□□□□ -2
DDX39AO00148 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.58□□□□□ -2
DDX39AO00148 AP005902.1-201ENST00000521358 186 ntBASIC2.58□□□□□ -2
DDX39AO00148 AP001372.4-201ENST00000524889 472 ntBASIC2.58□□□□□ -2
DDX39AO00148 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.58□□□□□ -2
DDX39AO00148 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.58□□□□□ -2
DDX39AO00148 MTCO3P13-201ENST00000577757 781 ntBASIC2.58□□□□□ -2
DDX39AO00148 MIR4446-201ENST00000578505 67 ntBASIC2.58□□□□□ -2
DDX39AO00148 AL356575.1-201ENST00000603008 283 ntBASIC2.58□□□□□ -2
DDX39AO00148 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.58□□□□□ -2
DDX39AO00148 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
DDX39AO00148 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
DDX39AO00148 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
DDX39AO00148 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.57□□□□□ -2
DDX39AO00148 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
DDX39AO00148 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.57□□□□□ -2
DDX39AO00148 Y_RNA.33-201ENST00000362591 102 ntBASIC2.57□□□□□ -2
DDX39AO00148 RNU1-138P-201ENST00000384093 164 ntBASIC2.57□□□□□ -2
DDX39AO00148 SNORA70B-201ENST00000384210 135 ntBASIC2.57□□□□□ -2
DDX39AO00148 MIR524-201ENST00000385242 87 ntBASIC2.57□□□□□ -2
DDX39AO00148 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.57□□□□□ -2
DDX39AO00148 RPS3AP44-201ENST00000425466 790 ntBASIC2.57□□□□□ -2
DDX39AO00148 AL593851.1-201ENST00000426171 157 ntBASIC2.57□□□□□ -2
DDX39AO00148 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.57□□□□□ -2
DDX39AO00148 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.57□□□□□ -2
DDX39AO00148 AC119618.1-201ENST00000434191 222 ntBASIC2.57□□□□□ -2
DDX39AO00148 AC018634.1-201ENST00000437554 401 ntBASIC2.57□□□□□ -2
DDX39AO00148 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.57□□□□□ -2
DDX39AO00148 AC003071.1-201ENST00000451219 789 ntBASIC2.57□□□□□ -2
DDX39AO00148 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.57□□□□□ -2
DDX39AO00148 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.57□□□□□ -2
DDX39AO00148 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.57□□□□□ -2
DDX39AO00148 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.57□□□□□ -2
DDX39AO00148 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.57□□□□□ -2
DDX39AO00148 AC012435.1-202ENST00000568772 240 ntBASIC2.57□□□□□ -2
DDX39AO00148 AC105137.2-201ENST00000569073 466 ntBASIC2.57□□□□□ -2
DDX39AO00148 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.57□□□□□ -2
DDX39AO00148 AL645944.1-201ENST00000603857 493 ntBASIC2.57□□□□□ -2
DDX39AO00148 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.57□□□□□ -2
DDX39AO00148 AC034229.4-201ENST00000607861 441 ntBASIC2.57□□□□□ -2
DDX39AO00148 MIR7844-201ENST00000616161 122 ntBASIC2.57□□□□□ -2
DDX39AO00148 AC104010.1-201ENST00000616889 150 ntBASIC2.57□□□□□ -2
DDX39AO00148 AL160394.1-201ENST00000624765 724 ntBASIC2.57□□□□□ -2
DDX39AO00148 Z82209.1-201ENST00000422141 2135 ntBASIC2.57□□□□□ -2
DDX39AO00148 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.57□□□□□ -2
DDX39AO00148 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.57□□□□□ -2
DDX39AO00148 Z75746.1-201ENST00000440243 2080 ntBASIC2.56□□□□□ -2
DDX39AO00148 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
DDX39AO00148 SNORA4.3-201ENST00000365564 137 ntBASIC2.56□□□□□ -2
DDX39AO00148 MIR221-201ENST00000385135 110 ntBASIC2.56□□□□□ -2
DDX39AO00148 SNORA40C-201ENST00000391285 128 ntBASIC2.56□□□□□ -2
DDX39AO00148 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.56□□□□□ -2
DDX39AO00148 AC003685.2-201ENST00000422795 395 ntBASIC2.56□□□□□ -2
DDX39AO00148 AC137499.1-201ENST00000427602 88 ntBASIC2.56□□□□□ -2
DDX39AO00148 AL512286.1-201ENST00000439244 400 ntBASIC2.56□□□□□ -2
DDX39AO00148 AL353705.4-201ENST00000449661 238 ntBASIC2.56□□□□□ -2
DDX39AO00148 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.56□□□□□ -2
DDX39AO00148 RPL36AP48-201ENST00000485521 314 ntBASIC2.56□□□□□ -2
DDX39AO00148 AC007182.2-201ENST00000489251 402 ntBASIC2.56□□□□□ -2
DDX39AO00148 HMGB3P3-201ENST00000510526 400 ntBASIC2.56□□□□□ -2
DDX39AO00148 SMURF2P1-201ENST00000514992 481 ntBASIC2.56□□□□□ -2
DDX39AO00148 RNU1-41P-201ENST00000516161 162 ntBASIC2.56□□□□□ -2
DDX39AO00148 RNU1-48P-201ENST00000516400 162 ntBASIC2.56□□□□□ -2
DDX39AO00148 SNORA31.15-201ENST00000516771 132 ntBASIC2.56□□□□□ -2
DDX39AO00148 RNA5SP337-201ENST00000517007 109 ntBASIC2.56□□□□□ -2
DDX39AO00148 AL133241.1-201ENST00000556832 487 ntBASIC2.56□□□□□ -2
DDX39AO00148 AC009063.1-201ENST00000563342 702 ntBASIC2.56□□□□□ -2
DDX39AO00148 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.56□□□□□ -2
DDX39AO00148 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
DDX39AO00148 MIR1273C-201ENST00000578669 77 ntBASIC2.56□□□□□ -2
DDX39AO00148 MIR5007-201ENST00000583098 95 ntBASIC2.56□□□□□ -2
DDX39AO00148 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.56□□□□□ -2
DDX39AO00148 AC116312.1-201ENST00000606841 314 ntBASIC2.56□□□□□ -2
DDX39AO00148 AL355816.2-201ENST00000610049 647 ntBASIC2.56□□□□□ -2
DDX39AO00148 AC024581.2-201ENST00000619986 252 ntBASIC2.56□□□□□ -2
DDX39AO00148 MIR6873-201ENST00000622788 63 ntBASIC2.56□□□□□ -2
DDX39AO00148 AC244517.12-201ENST00000623581 663 ntBASIC2.56□□□□□ -2
DDX39AO00148 AC010297.1-201ENST00000623948 149 ntBASIC2.56□□□□□ -2
DDX39AO00148 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
DDX39AO00148 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.56□□□□□ -2
DDX39AO00148 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
DDX39AO00148 RNU6-395P-201ENST00000365662 106 ntBASIC2.55□□□□□ -2
DDX39AO00148 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.55□□□□□ -2
DDX39AO00148 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.55□□□□□ -2
DDX39AO00148 MRPL42P2-201ENST00000403169 426 ntBASIC2.55□□□□□ -2
DDX39AO00148 MTCYBP36-201ENST00000404146 440 ntBASIC2.55□□□□□ -2
DDX39AO00148 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.55□□□□□ -2
DDX39AO00148 RNA5SP425-201ENST00000410336 112 ntBASIC2.55□□□□□ -2
DDX39AO00148 RN7SKP223-201ENST00000410582 62 ntBASIC2.55□□□□□ -2
DDX39AO00148 Y_RNA.608-201ENST00000410647 95 ntBASIC2.55□□□□□ -2
DDX39AO00148 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms