Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 USP9YP29-201ENST00000445112 563 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC188H7C350 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC188H7C350 AL583843.1-201ENST00000456070 346 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AC027673.1-201ENST00000456245 405 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 RPL21P39-201ENST00000463605 483 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 TRBV1-201ENST00000476502 284 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 RPL21P93-201ENST00000480465 489 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC188H7C350 AC093591.1-201ENST00000491435 481 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 RPL21P16-201ENST00000495531 483 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AC010424.1-201ENST00000506336 297 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC188H7C350 SNORD19.2-201ENST00000516978 73 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 SNORA31.18-201ENST00000517043 134 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 MTCYBP20-201ENST00000524239 1129 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC188H7C350 AL356057.1-201ENST00000533798 831 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC188H7C350 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC188H7C350 MIR3913-1-201ENST00000577744 102 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 MIR548AC-201ENST00000585049 88 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.74□□□□□ -1.97
CCDC188H7C350 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC188H7C350 AC012493.2-201ENST00000595083 291 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AC010620.1-201ENST00000601088 1102 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AC007938.3-201ENST00000604965 623 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AC098614.4-201ENST00000607601 462 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AC109347.2-201ENST00000610220 349 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AC135507.2-201ENST00000612443 309 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AC010678.1-201ENST00000614118 713 ntBASIC2.74□□□□□ -1.97
CCDC188H7C350 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC188H7C350 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC188H7C350 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CCDC188H7C350 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC188H7C350 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC188H7C350 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC188H7C350 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC188H7C350 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC188H7C350 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC188H7C350 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC188H7C350 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC188H7C350 SNORA62.1-201ENST00000364287 154 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC188H7C350 AL139039.1-201ENST00000401900 692 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 AL138885.1-201ENST00000405921 675 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 RNA5SP181-201ENST00000410246 98 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 RNU6-248P-201ENST00000410720 107 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 RNU6-387P-201ENST00000411331 105 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.73□□□□□ -1.97
CCDC188H7C350 AC236972.1-201ENST00000433225 199 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 RPS15AP7-201ENST00000439294 405 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 AC011816.1-201ENST00000441346 546 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 AC003071.1-201ENST00000451219 789 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 AC012308.1-201ENST00000451232 178 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 EIF4EP3-201ENST00000498782 656 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC188H7C350 ARL2BPP4-201ENST00000506854 471 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC188H7C350 RBBP4P6-201ENST00000508098 202 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC188H7C350 RNU5F-8P-201ENST00000515941 111 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.73□□□□□ -1.97
CCDC188H7C350 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC188H7C350 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC188H7C350 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CCDC188H7C350 LINC00933-203ENST00000559812 219 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 AC005261.5-201ENST00000596280 355 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC188H7C350 AC073648.5-201ENST00000603502 305 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 AC087752.4-201ENST00000605911 462 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CCDC188H7C350 AL162274.2-201ENST00000614406 332 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 U6.42-201ENST00000618440 107 ntBASIC2.73□□□□□ -1.97
CCDC188H7C350 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC188H7C350 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC188H7C350 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 RNU6-858P-201ENST00000362436 107 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 RNA5SP374-201ENST00000362939 125 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 Y_RNA.367-201ENST00000365544 101 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 Y_RNA.500-201ENST00000384466 111 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 RNU6-1179P-201ENST00000384667 107 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 U3.26-201ENST00000391236 204 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 OR51A5P-201ENST00000415429 942 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 MTND3P17-201ENST00000416968 344 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC188H7C350 MTCO2P34-201ENST00000421994 607 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 AC092427.1-202ENST00000430569 476 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC188H7C350 AL139132.1-201ENST00000431587 344 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC188H7C350 MTATP6P16-201ENST00000434543 526 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 AL353706.1-201ENST00000436728 494 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 MTCO2P16-201ENST00000436962 677 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 NANOGNBP1-201ENST00000448444 480 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC188H7C350 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC188H7C350 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC188H7C350 AC126389.1-201ENST00000477436 290 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 RPS29P26-201ENST00000477483 171 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms