Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 RPL21P39-201ENST00000463605 483 ntBASIC5.03□□□□□ -1.6
USP17L11C9JVI0 AC034236.1-201ENST00000469891 373 ntBASIC5.03□□□□□ -1.6
USP17L11C9JVI0 AC087190.1-201ENST00000484462 480 ntBASIC5.03□□□□□ -1.6
USP17L11C9JVI0 AC107032.1-201ENST00000485945 480 ntBASIC5.03□□□□□ -1.6
USP17L11C9JVI0 AC132942.1-201ENST00000486753 483 ntBASIC5.03□□□□□ -1.6
USP17L11C9JVI0 AC093591.1-201ENST00000491435 481 ntBASIC5.03□□□□□ -1.6
USP17L11C9JVI0 RPL21P129-201ENST00000491732 478 ntBASIC5.03□□□□□ -1.6
USP17L11C9JVI0 AC078817.1-201ENST00000492623 435 ntBASIC5.03□□□□□ -1.6
USP17L11C9JVI0 RPL21P16-201ENST00000495531 483 ntBASIC5.03□□□□□ -1.6
USP17L11C9JVI0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.03□□□□□ -1.6
USP17L11C9JVI0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.03□□□□□ -1.6
USP17L11C9JVI0 MIR6867-201ENST00000610636 67 ntBASIC5.03□□□□□ -1.6
USP17L11C9JVI0 FAM27D1-201ENST00000612308 341 ntBASIC5.03□□□□□ -1.6
USP17L11C9JVI0 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.03□□□□□ -1.6
USP17L11C9JVI0 AC005086.4-201ENST00000623065 213 ntBASIC5.03□□□□□ -1.6
USP17L11C9JVI0 AC034229.5-201ENST00000624258 185 ntBASIC5.03□□□□□ -1.6
USP17L11C9JVI0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
USP17L11C9JVI0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.03□□□□□ -1.6
USP17L11C9JVI0 RLIMP1-201ENST00000339626 1680 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP17L11C9JVI0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP17L11C9JVI0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP17L11C9JVI0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP17L11C9JVI0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.02□□□□□ -1.61
USP17L11C9JVI0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP17L11C9JVI0 RNU1-14P-201ENST00000362759 152 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 Y_RNA.105-201ENST00000363182 111 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 RNA5SP283-201ENST00000365604 119 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 Y_RNA.458-201ENST00000384240 102 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 RNY3P4-201ENST00000384428 101 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 MIR325-201ENST00000385260 98 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
USP17L11C9JVI0 RNU6-1197P-201ENST00000391183 107 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 MIR548I3-201ENST00000408378 149 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 MIR548I1-201ENST00000408810 149 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 RNU2-25P-201ENST00000411041 191 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 RN7SKP167-201ENST00000411047 285 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.02□□□□□ -1.61
USP17L11C9JVI0 AC092047.1-201ENST00000424997 240 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 RPL23AP25-201ENST00000430973 463 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 AC091286.1-201ENST00000431233 461 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.02□□□□□ -1.61
USP17L11C9JVI0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.02□□□□□ -1.61
USP17L11C9JVI0 RPL31P13-201ENST00000484151 370 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 RPL23AP49-201ENST00000492925 468 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 RPL30P5-201ENST00000494923 336 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 ANXA2P1-201ENST00000505539 926 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 AL592156.1-201ENST00000508758 304 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 Y_RNA.673-201ENST00000516306 88 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 RNA5SP519-201ENST00000516480 119 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 AC007458.1-201ENST00000542812 373 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 AC093023.1-201ENST00000547375 507 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 MIR4472-2-201ENST00000582069 67 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 AC010201.1-201ENST00000605051 540 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP17L11C9JVI0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
USP17L11C9JVI0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.02□□□□□ -1.61
USP17L11C9JVI0 AC126323.6-202ENST00000568092 3511 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP17L11C9JVI0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.02□□□□□ -1.61
USP17L11C9JVI0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP17L11C9JVI0 AL133243.3-201ENST00000617415 3004 ntBASIC5.02□□□□□ -1.61
USP17L11C9JVI0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.01□□□□□ -1.61
USP17L11C9JVI0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP17L11C9JVI0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP17L11C9JVI0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP17L11C9JVI0 RNU4-9P-201ENST00000364951 139 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 Y_RNA.439-201ENST00000384119 94 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 RNA5SP36-201ENST00000410197 133 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 RNU6-121P-201ENST00000410525 99 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.01□□□□□ -1.61
USP17L11C9JVI0 AL117339.2-201ENST00000430475 180 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 COX6B1P7-201ENST00000430845 235 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 AL512844.2-201ENST00000433990 593 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.01□□□□□ -1.61
USP17L11C9JVI0 AC091153.1-201ENST00000466297 402 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 RPL35AP15-201ENST00000468042 339 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 AC020593.1-201ENST00000507399 299 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.01□□□□□ -1.61
USP17L11C9JVI0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.01□□□□□ -1.61
USP17L11C9JVI0 CASP1P1-201ENST00000526345 212 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 ZNF192P1-203ENST00000565888 810 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 AC012433.1-201ENST00000588916 398 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.01□□□□□ -1.61
USP17L11C9JVI0 AC060766.3-201ENST00000591442 263 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 AC005255.1-201ENST00000593748 216 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.01□□□□□ -1.61
USP17L11C9JVI0 U6.92-201ENST00000636464 89 ntBASIC5.01□□□□□ -1.61
USP17L11C9JVI0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
USP17L11C9JVI0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP17L11C9JVI0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.01□□□□□ -1.61
USP17L11C9JVI0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP17L11C9JVI0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5□□□□□ -1.61
USP17L11C9JVI0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
USP17L11C9JVI0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
USP17L11C9JVI0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5□□□□□ -1.61
USP17L11C9JVI0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
USP17L11C9JVI0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
USP17L11C9JVI0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms