Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.29□□□□□ -1.88
CGB1A6NKQ9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.29□□□□□ -1.88
CGB1A6NKQ9 RPL23AP62-201ENST00000463396 453 ntBASIC3.29□□□□□ -1.88
CGB1A6NKQ9 AC018437.1-201ENST00000492214 406 ntBASIC3.29□□□□□ -1.88
CGB1A6NKQ9 RPS27AP13-201ENST00000498403 237 ntBASIC3.29□□□□□ -1.88
CGB1A6NKQ9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.29□□□□□ -1.88
CGB1A6NKQ9 AC093852.1-201ENST00000503587 266 ntBASIC3.29□□□□□ -1.88
CGB1A6NKQ9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.29□□□□□ -1.88
CGB1A6NKQ9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.29□□□□□ -1.88
CGB1A6NKQ9 AC040926.1-201ENST00000530195 238 ntBASIC3.29□□□□□ -1.88
CGB1A6NKQ9 AC009643.1-201ENST00000532030 391 ntBASIC3.29□□□□□ -1.88
CGB1A6NKQ9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.29□□□□□ -1.88
CGB1A6NKQ9 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.29□□□□□ -1.88
CGB1A6NKQ9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.29□□□□□ -1.88
CGB1A6NKQ9 AC022655.2-201ENST00000577280 318 ntBASIC3.29□□□□□ -1.88
CGB1A6NKQ9 MIR5188-201ENST00000583467 113 ntBASIC3.29□□□□□ -1.88
CGB1A6NKQ9 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.29□□□□□ -1.88
CGB1A6NKQ9 AC093227.2-201ENST00000589357 285 ntBASIC3.29□□□□□ -1.88
CGB1A6NKQ9 AC078899.3-201ENST00000599065 212 ntBASIC3.29□□□□□ -1.88
CGB1A6NKQ9 MTND4LP5-201ENST00000605152 292 ntBASIC3.29□□□□□ -1.88
CGB1A6NKQ9 RNU6-85P-201ENST00000605989 107 ntBASIC3.29□□□□□ -1.88
CGB1A6NKQ9 AC103858.2-201ENST00000621471 543 ntBASIC3.29□□□□□ -1.88
CGB1A6NKQ9 U6.104-201ENST00000637979 90 ntBASIC3.29□□□□□ -1.88
CGB1A6NKQ9 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.29□□□□□ -1.88
CGB1A6NKQ9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CGB1A6NKQ9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CGB1A6NKQ9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CGB1A6NKQ9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CGB1A6NKQ9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.29□□□□□ -1.88
CGB1A6NKQ9 AC032011.1-201ENST00000611703 1549 ntBASIC3.29□□□□□ -1.88
CGB1A6NKQ9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
CGB1A6NKQ9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CGB1A6NKQ9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CGB1A6NKQ9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CGB1A6NKQ9 OR56A5-201ENST00000340110 738 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 Y_RNA.526-201ENST00000384572 110 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 MIR514A1-201ENST00000385133 98 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 MIR493-201ENST00000385254 89 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 RNU6-174P-201ENST00000410406 106 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 RNA5SP39-201ENST00000411245 120 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.28□□□□□ -1.88
CGB1A6NKQ9 RPL21P90-201ENST00000415692 466 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 BX842559.1-201ENST00000419615 532 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AL158071.1-201ENST00000430315 461 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 HMGB1P27-201ENST00000431429 603 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 MTND2P29-201ENST00000438595 412 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.28□□□□□ -1.88
CGB1A6NKQ9 DAP3P1-201ENST00000441522 278 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AC006011.1-201ENST00000442758 349 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AL031274.1-201ENST00000450334 232 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.28□□□□□ -1.88
CGB1A6NKQ9 SNORD127-201ENST00000458892 86 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 RNA5SP246-201ENST00000458909 119 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 snoU13.1-201ENST00000459157 104 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AC011276.1-201ENST00000469688 323 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 RPS29P22-201ENST00000472363 168 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AC069499.1-201ENST00000489433 509 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 SNORA31.3-201ENST00000516029 96 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 RN7SKP40-201ENST00000517211 242 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 RNU6-840P-201ENST00000517275 65 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 IGKV2-38-201ENST00000517443 247 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AC104576.1-201ENST00000524225 88 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AP000889.1-201ENST00000530968 660 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AC007375.1-201ENST00000554513 578 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AC068790.4-201ENST00000602474 263 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AL160281.1-201ENST00000605307 311 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 MIR15A-201ENST00000607334 83 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AL591516.1-201ENST00000611326 274 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AF117829.1-206ENST00000621883 3802 ntBASIC3.28□□□□□ -1.88
CGB1A6NKQ9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CGB1A6NKQ9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.28□□□□□ -1.88
CGB1A6NKQ9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CGB1A6NKQ9 AC010615.1-201ENST00000594254 1764 ntBASIC3.28□□□□□ -1.89
CGB1A6NKQ9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CGB1A6NKQ9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CGB1A6NKQ9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
CGB1A6NKQ9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CGB1A6NKQ9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CGB1A6NKQ9 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CGB1A6NKQ9 AC005183.1-201ENST00000603687 1979 ntBASIC3.27□□□□□ -1.89
CGB1A6NKQ9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CGB1A6NKQ9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.27□□□□□ -1.89
CGB1A6NKQ9 RNA5SP509-201ENST00000364577 119 ntBASIC3.27□□□□□ -1.89
CGB1A6NKQ9 RNU4-42P-201ENST00000364738 142 ntBASIC3.27□□□□□ -1.89
CGB1A6NKQ9 RNU6-790P-201ENST00000384479 105 ntBASIC3.27□□□□□ -1.89
CGB1A6NKQ9 SNORA3C-201ENST00000408792 125 ntBASIC3.27□□□□□ -1.89
CGB1A6NKQ9 RNU6-1156P-201ENST00000410365 100 ntBASIC3.27□□□□□ -1.89
CGB1A6NKQ9 RAC1P3-201ENST00000416129 580 ntBASIC3.27□□□□□ -1.89
CGB1A6NKQ9 AC004552.1-201ENST00000419089 348 ntBASIC3.27□□□□□ -1.89
CGB1A6NKQ9 RPS15AP6-201ENST00000420703 385 ntBASIC3.27□□□□□ -1.89
CGB1A6NKQ9 HMGB1P9-201ENST00000429856 646 ntBASIC3.27□□□□□ -1.89
CGB1A6NKQ9 AC011742.1-201ENST00000431448 434 ntBASIC3.27□□□□□ -1.89
CGB1A6NKQ9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.27□□□□□ -1.89
CGB1A6NKQ9 NDUFB4P6-201ENST00000436819 366 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms